Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0387 |
Symbol | |
ID | 4689852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 383746 |
End bp | 385404 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639833380 |
Product | radical SAM domain-containing protein |
Protein accession | YP_980631 |
Protein GI | 121603302 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.971696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.247194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCCC CTCAAGCGCC TGATTCGACC TTTTCGCCCG CCATCGTCCT GGCCACGCTC AATGCCAAGT ACATCCACGC CGCGCTGGGC CTGCGCTGCC TGCTGGCCAA CCTGGACCGC CACGGCGGCG CCGGCCTGCG CGCCGTGACG CAGCTGCGCG AATTCACTAT TGGGCAGCGG CCCGTGCAGA TCGTCGAAAG CCTGCTGGCG CTCAGCCCCA AGGTGATCGG GCTGGGCGTC TATATCTGGA ACGTGGTCGA AACGACGCAG GTCGTGCGCC TCCTGAAAAC CCTGCGCCCC GACATCAAGA TCGTGCTCGG CGGGCCGGAG GTCAGCTTTG AAACCGGCGA GCAGGAAATC TGCCGGCTGG CCGACCATGT GGTCACCGGC TGGGGCGACG TGAGTTTTCC CAAGCTGTGC CGCGCCTTGC TCGACGGCCC GCAGCCGCTG ATGAAAATCA TCGCCGGCGA GCAGCCGCCT TTGGACGCGC TGGCCTTGCC CTACGGCGAA TACACCGACG AGGATCTGGC CAAGCGCCTG CTGTATGTCG AAGCCTCGCG CGGCTGCCCG TTCAAGTGCG AGTTCTGCCT GAGTTCGCTC GACAAGACCG CGTGGGCCTT CGAGCTGGAC CGCTTCATGG CCGAAATGGC GCTGCTCTAC CGGCGCGGGG CGCGCAATTT CAAGTTCGTG GACCGCACGT TCAATTTGAA GGTGGATTTT TCGGTGCGCA TCCTGCAGTT TTTCCTGGAC CGCATGAAGG ACGAGGCGGG CGCGGTGCAG GCCGCGCCGG GGCTGTTCGT GCATTTCGAG GTTGTTCCCG ACAGCCTGCA CGAGCGGCTG AAAGCGCTGA TCGCGCAGTT TCCGGCCGGC TCGCTGCAGT TCGAGGTCGG CATCCAGAGC TTCAACCCCG AGGTGCAGCA GCGCATTTCG CGCAAGCAGG ACAATGCAAA AACCGCCGAG AACCTGCGCT GGCTGGTCAC GCAAAGCCAG GCGCATGTTC ACGCCGACCT GATCTTCGGC CTGCCGGGCG AGACGCTGCA GAGCTTTGCC GAGGGCTTTG ACCGCCTGCA TGAACTCGCT CCGCATGAAA TCCAGTTCGG CATCTTGAAG CGGCTGCGCG GCACGCCGAT CACGCGGCAC ACGCTGGACT TTGCGATGGC CTACGACCCG CAGACGCCGT ACACGATTCT GCAAACCTCG ACGATTGACT TTGCGACCAT GCAGCGCATC CAGCGCTTTG CGCGCTACTG GGAAATGGTC GCCAACTCGG GCCGGTTTTC AGCGGCGCTG CGCCTGCTGC TGCGGGATGG CCCGGAGGTG GCGGGTTCGG CCTTTCACCA TTTCCTGGAC TTCAGCGACT GGCTCTGGCG CACGACGGCC AAGACGCATG AATTCGCGCT GGAAAAGCTG GTCGATGTGC TGTTTGAGCA CCTGACGGCA GTGCGCGGGC TGAACGATGA CGCGGTGCGC GCCGCGCTGC TGGCCGATTA CCGCGCCAGC GGCGCGCGCG GCCGGCCGCA ATGCCTGGCG GATCTGCTGG CTGCCGGGCG TGCGGACTTG CCGGCAGGGG CGGCCAAGCC CCGGTCCGAG CGGCAGGGCC GGCATGTCAG CCAGCAAACG CACCGCGACG CCATTCAACA AGCGGCGGCG GCTGCCTGA
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Protein sequence | MPSPQAPDST FSPAIVLATL NAKYIHAALG LRCLLANLDR HGGAGLRAVT QLREFTIGQR PVQIVESLLA LSPKVIGLGV YIWNVVETTQ VVRLLKTLRP DIKIVLGGPE VSFETGEQEI CRLADHVVTG WGDVSFPKLC RALLDGPQPL MKIIAGEQPP LDALALPYGE YTDEDLAKRL LYVEASRGCP FKCEFCLSSL DKTAWAFELD RFMAEMALLY RRGARNFKFV DRTFNLKVDF SVRILQFFLD RMKDEAGAVQ AAPGLFVHFE VVPDSLHERL KALIAQFPAG SLQFEVGIQS FNPEVQQRIS RKQDNAKTAE NLRWLVTQSQ AHVHADLIFG LPGETLQSFA EGFDRLHELA PHEIQFGILK RLRGTPITRH TLDFAMAYDP QTPYTILQTS TIDFATMQRI QRFARYWEMV ANSGRFSAAL RLLLRDGPEV AGSAFHHFLD FSDWLWRTTA KTHEFALEKL VDVLFEHLTA VRGLNDDAVR AALLADYRAS GARGRPQCLA DLLAAGRADL PAGAAKPRSE RQGRHVSQQT HRDAIQQAAA AA
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