Gene Pnap_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0379 
Symbol 
ID4689458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp377049 
End bp377372 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content67% 
IMG OID639833372 
Producthypothetical protein 
Protein accessionYP_980623 
Protein GI121603294 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.650719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGG GCCAGATCCG CAACATCACG GGCGAGTCCT TCTTTGCCTG GGACGGCGAC 
GTGCTGGTGG TCAACATCCT GGGCAAGCCC AGCGCCGGCA AGGACGCCAT CGGCAAGCCC
AAGGGCACAC AGCTCAAGGT CAGCGTGACG GCCGCGCCGC TGGCGGGCAA GGCGACCGAC
CACATGGTGC GCTTTCTGGC GCCGCTGTTC GGCGTGGCCG TGGCCGACAT CGAGGTGGTG
TTCGGGCGCG AGAACGTCAA CAAGCAGTTG CGCATCCGGG CGCCGAAAAA ACTGCCGGCG
GTGTTTTTGC CGCCAGCCCC GTAA
 
Protein sequence
MSRGQIRNIT GESFFAWDGD VLVVNILGKP SAGKDAIGKP KGTQLKVSVT AAPLAGKATD 
HMVRFLAPLF GVAVADIEVV FGRENVNKQL RIRAPKKLPA VFLPPAP