| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0367 |
|---|
| Symbol | |
|---|
| ID | 4689965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 366415 |
|---|
| End bp | 366819 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639833360 |
|---|
| Product | roadblock/LC7 family protein |
|---|
| Protein accession | YP_980611 |
|---|
| Protein GI | 121603282 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.629911 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTCG ACAACAGTTC AGCTGAAGTG ACTGCCAGCA AAATCCGGGC GGCGCTGCGC
AGTTTGTGTG CTTCCTCGGA CACGGTGGAA GCGGCCGCGC TGGTTTCTCA TGATGGCCTG
ATCATTGCCT CCGTCATGTC CAGGGAGGTC GATGTCGATC GTTTCGGCGC CATGTGCGCG
TCCCTGCTGG CGCTGGCCAA TCGCGCCGCC AAAGAGGTCC GCAGGGGCGA TCTGCGGCAG
ATCATCCTTG ATGGCAGCCT GGGGCCCATG CTGCTGACCC GGGCTGGCGA AACCGGTGTT
CTGGCCGTGG CGGCCACCCC TTCGGCGAAA CTGGGGCAAC TGATCCTCGA CACCCGAACC
ACGGCGCGGG CGGTGTCCGA ATTAACCGAG CCCAGGGAGG CTTGA
|
|---|
| Protein sequence | MNFDNSSAEV TASKIRAALR SLCASSDTVE AAALVSHDGL IIASVMSREV DVDRFGAMCA
SLLALANRAA KEVRRGDLRQ IILDGSLGPM LLTRAGETGV LAVAATPSAK LGQLILDTRT
TARAVSELTE PREA
|
|---|
| |