| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0363 |
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| Symbol | hemE |
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| ID | 4690199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 363768 |
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| End bp | 364877 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833356 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_980607 |
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| Protein GI | 121603278 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.178148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.394936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCAC CCCTTCAAAA CGACACTTTC CTGCGTGCCT GCCTGCGTCA GGCGACCGAC
CACACCCCGG TCTGGCTGAT GCGCCAGGCT GGCCGCTACC TGCCCGAATA CAAGGCCACG
CGCGCCAAGG CCGGCAGCTT CATGGGGCTG GCGACCAACA CCGACTACGC CACCGAAGTC
ACGCTGCAGC CGCTGGAGCG CTACCCGCTC GATGCGGCCA TCTTGTTCAG CGACATCCTG
ACCGTGCCCG ACGCGATGGG CCTGGGCCTG TCGTTCGCGC TCGGCGAAGG CCCGAGGTTC
GCCACGCCGG TGCGCGACGA AGCGGCGGTC AACAAGCTCG AAGTGCCCGA CATGAACAAG
CTGCGCTATG TGTTCGACGC CGTCACGTCG ATCCGCAAGG CGCTGGGTGG CCGCGTGCCG
CTGATCGGCT TTTCGGGCAG CCCCTGGACG CTGGCCTGCT ACATGGTCGA AGGCAGCGGC
TCGGACGACT ACCGGCTGGT CAAGACCATG CTGTATCAGC GCCCCGACCT GATGCACAAG
ATGCTGGCGA TCAACGCCGA CGCCGTGGCT CTGTACCTGA ACGCGCAGAT CGAGGCCGGC
GCCCAGGCCG TGATGATTTT CGACAGCTGG GGCGGCGTGC TGGCCGATGC GGCCTTTCAC
ACCTTCAGCC TGGCCTACAC CGCGCGCGTG CTGAGTCAGC TCAAGCGCGA ACACAAGGGC
GTGACCATTC CGCGCCTGGT GTTCACCAAG GGCGGCGGCC AGTGGCTCGA ATCCATGAAG
CAGCTCGACT GCGAAGTGCT GGGCCTGGAC TGGACCGTGA ACCTGGCCAA AGCACGCGCG
CTGGTCGGCG AGAACGGCCC GAACGCCAAG GCGCTGCAGG GCAACCTGGA CCCGAACGTG
CTGTTCGCCA ACCCGGCGCA GATCGAGGCC GAAGTGGCCG CCGTGCTGAA CAGCTTCGGC
GCGCCACACA CCGACCTGAC GCAAACCGGA CCGACGCAGA TTTTCAATCT GGGCCACGGC
ATCAGCCAGC ACACGCCGCC TGAAAGCGTC GAAGTGCTGG TGCGCGCGGT GCATGCGCAC
TCGCGCAGCC TGCGAAAACA GCAGGGCTGA
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| Protein sequence | MFAPLQNDTF LRACLRQATD HTPVWLMRQA GRYLPEYKAT RAKAGSFMGL ATNTDYATEV
TLQPLERYPL DAAILFSDIL TVPDAMGLGL SFALGEGPRF ATPVRDEAAV NKLEVPDMNK
LRYVFDAVTS IRKALGGRVP LIGFSGSPWT LACYMVEGSG SDDYRLVKTM LYQRPDLMHK
MLAINADAVA LYLNAQIEAG AQAVMIFDSW GGVLADAAFH TFSLAYTARV LSQLKREHKG
VTIPRLVFTK GGGQWLESMK QLDCEVLGLD WTVNLAKARA LVGENGPNAK ALQGNLDPNV
LFANPAQIEA EVAAVLNSFG APHTDLTQTG PTQIFNLGHG ISQHTPPESV EVLVRAVHAH
SRSLRKQQG
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