Gene Pnap_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0362 
Symbol 
ID4690112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp361263 
End bp363392 
Gene Length2130 bp 
Protein Length709 aa 
Translation table11 
GC content69% 
IMG OID639833355 
Productprimosomal protein N' 
Protein accessionYP_980606 
Protein GI121603277 
COG category[L] Replication, recombination and repair 
COG ID[COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase 
TIGRFAM ID[TIGR00595] primosomal protein N' 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.265583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.361884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACT GGTTGCAGAT AGTGGTTGCC ACGCCGGCGC ACAGCGCCAT CGCCGGCCCG 
CTGACCTACC GCAGCGCCTT GCTGCTGCGC CCCGGCACGC TGGTGCGCGT TCCGTTTGGC
AGGCGCGAGG TGCTGGGCGT GGTGTGGCAG GTGTTGCCGG ACAGCGGCGG CATGCCCGAA
GCAAGCATCC GCGACATTGC CGGCGTGCTG GACGGGCTGG CGCCGCTGTC ATCGACCTGG
CGCCGGCTGG TGGCCTTTAC CGCCGGCTAT TACCAGCGCT CGCTCGGCGA GGTGGCGCTG
GCTGCCCTGC CGCCGCAGTT GCGCGACCTC ACGACGCTGC AGCTGACGCG CCGGCTCAAG
CGGACGGTGG TGGACACCAG CCACCCGCAA GACACTACTG ATTTAATAGC ACTCAGCGCA
CAGCAGGCGT GCGCAATAGC CGAATTTGAT GCTGAAACCA GTGAAAAACA GCGGCCCGCG
CTGCTGTTTG GCGCCACCGG CAGCGGCAAG ACCGAGGTGT ACCTGCGCGC CGCCGCCAAA
GTCCTGGAGC AAGACCCCGA GGCGCAGGTG CTGGTGATGG TGCCCGAGAT CAACCTCACG
CCGCAGCTGC AGGCCCGGTT TGAAGCGCGC TTTGCCCATC TGGGCCGGGA GCGCGTCGTG
CCGATGCACA GCGGACTCAC GCCCGCCCAA CGGCTCAAGG GCTGGCTGGC CGCGCATTCG
GGCCAGGCGC GGCTGGTGCT GGGAACGCGC ATGGCCGTGT TCGCGTCGAT GCCGAACCTG
CGCCTGCTGG TGGTCGATGA GGAACACGAT CCGAGCTACA AGCAGCAGGA AGGCGCGCGC
TACTCGGCGC GCGACCTGGC GGTGTACCGC GCCCGGCTGG AAACCCGCGA CAGGGAGCAT
CCGCATGGTG CCTGCCGCGT GCTGCTGGGC TCAGCCACGC CTTCGCTGGA AAGCTGGCAG
GCGACGATTG TGGGCCGCTA CCAGCGCCTG AACATGAACG AGCGGATCGG GGCCAGCCCG
GCAGGTCAGC CGGGCGGCTT GCCCACGGTC AGGCGGGTGG ACATGAACCA CCAGCCCAAG
CACTGCGTCA TCGCGCCGCC GCTGCTGGCG GCCATCGGCG AGCGGGTGGC GCGCGGCGAG
CAGTCGATGA TTTTCCTGAA CCGGCGCGGC TATGCGCCGG TGCTGGCCTG CCACGACTGC
GACTGGAAAA GCGACTGCCC GCACTGCAGC GCCTACCGCG TGTTCCACAA GATCGACCGC
ACGCTGCGCT GCCACCACTG CGGCTTCACC GAACGCGTGC CGCGCGCCTG CCCGAGCTGC
GGCAACATCG ACATCGCCCC GGTCGGGCGC GGCACCGAGC GGCTCGAAGA ACACCTGGCC
GAACTGCTGG CCAATGTCAC GCGGCCGGAC GGCGGCCCGG TGCGCATTGC CCGCATCGAC
GCCGACAGCA CCCGGCTCAA GGGCTCGCTC GAATCGCAGC TGGCCAGCGT GCATGCCGGC
GAGGTCGATG TGCTGGTCGG CACGCAGATG ATCGCCAAGG GCCACGACTT CAGGCACATC
ACGCTGGTGG CCGCCATCAA CACCGACAGC GCGCTGTTTT CCAGCGACTT CCGCGCCCCC
GAGCGGCTGT TCAGCCTGTT GATGCAGGCG GCGGGCCGCG CCGGCCGCGA TGCCCAGCGC
AGCGCCGCCA GCGAAATGTG GGTGCAGACC TTTCACCCCG ACCATCCGCT GTTCGAGGCG
CTCAAGCGGC ACGACTACCC GGATTTTGCC GAGCAGCAAC TGGCCGAGCG GCAGGCGGCC
GGCCTGTCGC CGTTCGGTTT TTCAGCCTTG ATACGGGCCG ACGCCAAGAC CCAGGAAGTC
GCCCAGGGTT TCCTGAACGC CGCCGCCGAG GCCGCCCAGA CGCAGCAGCT GCCCGGCCAT
GCCCACGTCA TGGCCTACCC GGCCGTGCCG ATGACGATCC AGCGCGTGGC GAATATCGAG
CGCGCGCAAA TGCTGGTCGA AAGCCCGTCG CGCAAGGCGC TGCAGGGCTT TCTGGCCGCC
TGGCAGCCGC TGCTGTTTGA AACCCGCAGG CAGGCGGAAT TCAAAAGCCT GGTGCGCTGG
GCGATTGACG TGGACCCGAT TGCGATTTGA
 
Protein sequence
MSHWLQIVVA TPAHSAIAGP LTYRSALLLR PGTLVRVPFG RREVLGVVWQ VLPDSGGMPE 
ASIRDIAGVL DGLAPLSSTW RRLVAFTAGY YQRSLGEVAL AALPPQLRDL TTLQLTRRLK
RTVVDTSHPQ DTTDLIALSA QQACAIAEFD AETSEKQRPA LLFGATGSGK TEVYLRAAAK
VLEQDPEAQV LVMVPEINLT PQLQARFEAR FAHLGRERVV PMHSGLTPAQ RLKGWLAAHS
GQARLVLGTR MAVFASMPNL RLLVVDEEHD PSYKQQEGAR YSARDLAVYR ARLETRDREH
PHGACRVLLG SATPSLESWQ ATIVGRYQRL NMNERIGASP AGQPGGLPTV RRVDMNHQPK
HCVIAPPLLA AIGERVARGE QSMIFLNRRG YAPVLACHDC DWKSDCPHCS AYRVFHKIDR
TLRCHHCGFT ERVPRACPSC GNIDIAPVGR GTERLEEHLA ELLANVTRPD GGPVRIARID
ADSTRLKGSL ESQLASVHAG EVDVLVGTQM IAKGHDFRHI TLVAAINTDS ALFSSDFRAP
ERLFSLLMQA AGRAGRDAQR SAASEMWVQT FHPDHPLFEA LKRHDYPDFA EQQLAERQAA
GLSPFGFSAL IRADAKTQEV AQGFLNAAAE AAQTQQLPGH AHVMAYPAVP MTIQRVANIE
RAQMLVESPS RKALQGFLAA WQPLLFETRR QAEFKSLVRW AIDVDPIAI