Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0362 |
Symbol | |
ID | 4690112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 361263 |
End bp | 363392 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639833355 |
Product | primosomal protein N' |
Protein accession | YP_980606 |
Protein GI | 121603277 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.265583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.361884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACT GGTTGCAGAT AGTGGTTGCC ACGCCGGCGC ACAGCGCCAT CGCCGGCCCG CTGACCTACC GCAGCGCCTT GCTGCTGCGC CCCGGCACGC TGGTGCGCGT TCCGTTTGGC AGGCGCGAGG TGCTGGGCGT GGTGTGGCAG GTGTTGCCGG ACAGCGGCGG CATGCCCGAA GCAAGCATCC GCGACATTGC CGGCGTGCTG GACGGGCTGG CGCCGCTGTC ATCGACCTGG CGCCGGCTGG TGGCCTTTAC CGCCGGCTAT TACCAGCGCT CGCTCGGCGA GGTGGCGCTG GCTGCCCTGC CGCCGCAGTT GCGCGACCTC ACGACGCTGC AGCTGACGCG CCGGCTCAAG CGGACGGTGG TGGACACCAG CCACCCGCAA GACACTACTG ATTTAATAGC ACTCAGCGCA CAGCAGGCGT GCGCAATAGC CGAATTTGAT GCTGAAACCA GTGAAAAACA GCGGCCCGCG CTGCTGTTTG GCGCCACCGG CAGCGGCAAG ACCGAGGTGT ACCTGCGCGC CGCCGCCAAA GTCCTGGAGC AAGACCCCGA GGCGCAGGTG CTGGTGATGG TGCCCGAGAT CAACCTCACG CCGCAGCTGC AGGCCCGGTT TGAAGCGCGC TTTGCCCATC TGGGCCGGGA GCGCGTCGTG CCGATGCACA GCGGACTCAC GCCCGCCCAA CGGCTCAAGG GCTGGCTGGC CGCGCATTCG GGCCAGGCGC GGCTGGTGCT GGGAACGCGC ATGGCCGTGT TCGCGTCGAT GCCGAACCTG CGCCTGCTGG TGGTCGATGA GGAACACGAT CCGAGCTACA AGCAGCAGGA AGGCGCGCGC TACTCGGCGC GCGACCTGGC GGTGTACCGC GCCCGGCTGG AAACCCGCGA CAGGGAGCAT CCGCATGGTG CCTGCCGCGT GCTGCTGGGC TCAGCCACGC CTTCGCTGGA AAGCTGGCAG GCGACGATTG TGGGCCGCTA CCAGCGCCTG AACATGAACG AGCGGATCGG GGCCAGCCCG GCAGGTCAGC CGGGCGGCTT GCCCACGGTC AGGCGGGTGG ACATGAACCA CCAGCCCAAG CACTGCGTCA TCGCGCCGCC GCTGCTGGCG GCCATCGGCG AGCGGGTGGC GCGCGGCGAG CAGTCGATGA TTTTCCTGAA CCGGCGCGGC TATGCGCCGG TGCTGGCCTG CCACGACTGC GACTGGAAAA GCGACTGCCC GCACTGCAGC GCCTACCGCG TGTTCCACAA GATCGACCGC ACGCTGCGCT GCCACCACTG CGGCTTCACC GAACGCGTGC CGCGCGCCTG CCCGAGCTGC GGCAACATCG ACATCGCCCC GGTCGGGCGC GGCACCGAGC GGCTCGAAGA ACACCTGGCC GAACTGCTGG CCAATGTCAC GCGGCCGGAC GGCGGCCCGG TGCGCATTGC CCGCATCGAC GCCGACAGCA CCCGGCTCAA GGGCTCGCTC GAATCGCAGC TGGCCAGCGT GCATGCCGGC GAGGTCGATG TGCTGGTCGG CACGCAGATG ATCGCCAAGG GCCACGACTT CAGGCACATC ACGCTGGTGG CCGCCATCAA CACCGACAGC GCGCTGTTTT CCAGCGACTT CCGCGCCCCC GAGCGGCTGT TCAGCCTGTT GATGCAGGCG GCGGGCCGCG CCGGCCGCGA TGCCCAGCGC AGCGCCGCCA GCGAAATGTG GGTGCAGACC TTTCACCCCG ACCATCCGCT GTTCGAGGCG CTCAAGCGGC ACGACTACCC GGATTTTGCC GAGCAGCAAC TGGCCGAGCG GCAGGCGGCC GGCCTGTCGC CGTTCGGTTT TTCAGCCTTG ATACGGGCCG ACGCCAAGAC CCAGGAAGTC GCCCAGGGTT TCCTGAACGC CGCCGCCGAG GCCGCCCAGA CGCAGCAGCT GCCCGGCCAT GCCCACGTCA TGGCCTACCC GGCCGTGCCG ATGACGATCC AGCGCGTGGC GAATATCGAG CGCGCGCAAA TGCTGGTCGA AAGCCCGTCG CGCAAGGCGC TGCAGGGCTT TCTGGCCGCC TGGCAGCCGC TGCTGTTTGA AACCCGCAGG CAGGCGGAAT TCAAAAGCCT GGTGCGCTGG GCGATTGACG TGGACCCGAT TGCGATTTGA
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Protein sequence | MSHWLQIVVA TPAHSAIAGP LTYRSALLLR PGTLVRVPFG RREVLGVVWQ VLPDSGGMPE ASIRDIAGVL DGLAPLSSTW RRLVAFTAGY YQRSLGEVAL AALPPQLRDL TTLQLTRRLK RTVVDTSHPQ DTTDLIALSA QQACAIAEFD AETSEKQRPA LLFGATGSGK TEVYLRAAAK VLEQDPEAQV LVMVPEINLT PQLQARFEAR FAHLGRERVV PMHSGLTPAQ RLKGWLAAHS GQARLVLGTR MAVFASMPNL RLLVVDEEHD PSYKQQEGAR YSARDLAVYR ARLETRDREH PHGACRVLLG SATPSLESWQ ATIVGRYQRL NMNERIGASP AGQPGGLPTV RRVDMNHQPK HCVIAPPLLA AIGERVARGE QSMIFLNRRG YAPVLACHDC DWKSDCPHCS AYRVFHKIDR TLRCHHCGFT ERVPRACPSC GNIDIAPVGR GTERLEEHLA ELLANVTRPD GGPVRIARID ADSTRLKGSL ESQLASVHAG EVDVLVGTQM IAKGHDFRHI TLVAAINTDS ALFSSDFRAP ERLFSLLMQA AGRAGRDAQR SAASEMWVQT FHPDHPLFEA LKRHDYPDFA EQQLAERQAA GLSPFGFSAL IRADAKTQEV AQGFLNAAAE AAQTQQLPGH AHVMAYPAVP MTIQRVANIE RAQMLVESPS RKALQGFLAA WQPLLFETRR QAEFKSLVRW AIDVDPIAI
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