| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0359 |
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| Symbol | |
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| ID | 4689667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 357176 |
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| End bp | 359512 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639833352 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_980603 |
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| Protein GI | 121603274 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.260825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCA GCAAGCTGAT CCCTCTGTCA GGCACGGTAC CGGGGACACC CGGCCGCAAG
CGTTCCGATG AGGCGGGCCG TGCAAGCGAG GCACAGTTTC GCCTGCTGAT GGACGCCATG
CCCCAGATCG TCTGGATGAT GCGGCCCGAT GGCCAGGCGA CTTACTTCAA TCAGCGCTGG
CTTGACTATT CAGGCTGGTC CCTGAAAGAC AGTCTCGGCC ACGGCTGGAT TGGACTCGTT
CATCCCGATG ACAGCCTGCG GGTTTCCAGG CTTTTGGTGC AGGCCTGCGG CGGCGGCGAG
CCGTGTGAAA TCGAATGCCG GCTGCGCCGG GCCGACGGCG TCTATCGCTG GATGCTGGGC
CGCACGGCTG CGCAATCCGA TGCGGCAGGC CGGACGACCC AGTGGCTGGG CACCTTGACC
GATATTGACG AGCTGAAGCA GTCCAGGGAG ATTCTGGAGA AAGACCTCGC CATGAACCGG
ATCGCCGGCA GGGTGGCCCG CCTGGGCGGA TGGGCGATTG AGCTGCCCGA GCGCAGGCTG
ATCTGGTCGG ATGAAAACTG CCTGATTCAC GATGTACCGC CCGGTTACCA GCCGACGCTG
GAAGAGGGGA TTGGTTTCTT TTTCCCGGAA CACCGGGCCA TCGTCGCCCG TCATGTGCAG
GACTGCGCCG AGCACGGCAT TCCTTACGAA TTCGTGCTGC CCAAGCGCAC CGCCACGGGC
CGGCACATCT GGGTGCGGTC CATCGCCGAG GCGGTGCGCG ATGAAGCGGG GAAAATTGTC
AGCATCCAGG GCGCTTTTCA GGACATCTCG GAGCAAAAAG AGGCCGAGGC CCGCATGCTC
GCCCTGGAGG CGCGGCTCAC CGCCACGCTG GAAAGTATCA CGGACGGCTT TTGCCTGATC
GACAAGGACT GGAAGTTCAC CTTCATGAAC GGTCAGGCGC AGCGCATGCT CAAGCGCTGC
CCGGAAGACC TGCTGGGCAA AATCCTGTGG CAGGAATTTC CGGAAGCCGT GGGCACGCGC
ATCGAGCGCG AATGCCGCCT GTCGATGCAG GAGCAGCGCA CGATCCGCCT TGAAACCTTT
TACCTGCCGC TGAAGACCTG GTTTCATTTC CACATCTATC CCACGGAGGC CGGGCTGGCG
GTTTACTTTC AGGACATCAC CCAAAGACGC ACGGAGCAAG CCCAGCTGCG CCTGCTGGAA
ACGGCGGTGT CGCGGCTGAA CGACATGGTG GTCATCATGG AAGCCGAACC CTTCGATGCA
TCGGGCCGGC GCATTGTGTT TGTGAACGAT GCGTTCGAGC GCCAGACCGG CTACAGCCGC
AGCGACATCA TCGGAAAGAC GCCCACGCTG CTCTGGGGAG CCAACACCTG CCACCCCGAG
GTGGAACGCA TCCTCAGTGC CATGGACAAC TGGCAGCCCG TGCGCGCTGA AGTGGTCATT
TACACCAAGG CCGGCAAGGA GCTTTGGGTG GAAACCGACA TTGCGCCCAT CGCCAACGTG
TCCGGCAAAT TCACCCATTG GGTGGCTGTC GAGCGCGACA TCACCGAGCG CAGGCAGCAG
CAACAGGAAA TTCTGAGCCT CAATGGCGAA CTCGAAGAGC GCGTGCTGCT GCGCACCGCC
CAGCTTGCAA CGGCCACCAG GGAGCTGGAG TCCTTTGCCT ATTCGGTCTC GCATGACCTG
CGCTCGCCCC TCAACACCAT CCATGCCTTC AGCCAGTTGC TGCTGAAGAT TGACGGCGGG
CAGATCAGCG ACAAGGGCAA GCATTACCTG GACCGGATCG GTGTGGGCGT CAAGCAGATG
GGCGATCTGA TCGAGGGCCT GCTGGCCCTT GCGCAACTGT CCCGCGAGCA GATCAAGTCA
GAGCAGGTCG ATCTCTCGAA CATCGCCCGG CGCATCGAAC AGGACTGCCG GGAGCGCGAG
CCGCAGCGCC AGGCCCAGCT GCGCATTCAG GACGGCCTGA GCGCGCAGGG CGACGCCCGC
TTGCTGTCGG CGGTCTTTCA AAACCTGCTG GGCAACGCGT GGAAATTCAC GTCCCGGCAG
TCGCTGGCGC ATATCGAGGT GGGCAGCGAG TCGGGCGTTG ATGGCGACAC CGTCTTTTTC
GTCAAGGACA ACGGTGCCGG GTTTGACATG GCTTTTGCGC ACAAGCTGTT TGGCACCTTC
GAGCGTCTGC ATTCGCCGGG GGATTTCTCG GGAACCGGCA TCGGGCTGGC CACCGTGAAG
CGCATCATTG AACGCCACGG CGGCCGCGTC TGGGCTGAAA GCAAGCTGAA CGAAGGCGCG
AGGTTCTTTT TTACCCTGGG CCGCAAGGAT GGCGCTCAGA CCAGCCGGGC CACCTGA
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| Protein sequence | MTGSKLIPLS GTVPGTPGRK RSDEAGRASE AQFRLLMDAM PQIVWMMRPD GQATYFNQRW
LDYSGWSLKD SLGHGWIGLV HPDDSLRVSR LLVQACGGGE PCEIECRLRR ADGVYRWMLG
RTAAQSDAAG RTTQWLGTLT DIDELKQSRE ILEKDLAMNR IAGRVARLGG WAIELPERRL
IWSDENCLIH DVPPGYQPTL EEGIGFFFPE HRAIVARHVQ DCAEHGIPYE FVLPKRTATG
RHIWVRSIAE AVRDEAGKIV SIQGAFQDIS EQKEAEARML ALEARLTATL ESITDGFCLI
DKDWKFTFMN GQAQRMLKRC PEDLLGKILW QEFPEAVGTR IERECRLSMQ EQRTIRLETF
YLPLKTWFHF HIYPTEAGLA VYFQDITQRR TEQAQLRLLE TAVSRLNDMV VIMEAEPFDA
SGRRIVFVND AFERQTGYSR SDIIGKTPTL LWGANTCHPE VERILSAMDN WQPVRAEVVI
YTKAGKELWV ETDIAPIANV SGKFTHWVAV ERDITERRQQ QQEILSLNGE LEERVLLRTA
QLATATRELE SFAYSVSHDL RSPLNTIHAF SQLLLKIDGG QISDKGKHYL DRIGVGVKQM
GDLIEGLLAL AQLSREQIKS EQVDLSNIAR RIEQDCRERE PQRQAQLRIQ DGLSAQGDAR
LLSAVFQNLL GNAWKFTSRQ SLAHIEVGSE SGVDGDTVFF VKDNGAGFDM AFAHKLFGTF
ERLHSPGDFS GTGIGLATVK RIIERHGGRV WAESKLNEGA RFFFTLGRKD GAQTSRAT
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