Gene Pnap_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0358 
Symbol 
ID4689640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp355874 
End bp356878 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content66% 
IMG OID639833351 
ProductATPase central domain-containing protein 
Protein accessionYP_980602 
Protein GI121603273 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.952613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.21388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCA TTCAAGTCGT TCCCCAGGCG CCCACCTTCA CGCTACCCGT TGCCAAGGTG 
CGAAGTGTCT ACCAGATTGC TGATGTCGAG CGCAAGCTGG GCAAGCTGCA AAACAGCGAA
CCCCGCGAAC ACGACAACTT GCGCGCTACC TACGAGCGCA TGCTGGAGCG AGGCCCCGAG
CGCTTCCAGA TGAAGCCCAG CGGCATTCCC GAAATGGCCC CCCTCTACGA CGCGCTGCCC
AACTTCACCG ACGTGCTGGA CGACGTGCGG CGCCATGTGG CCCTGAGCCA CGACAGCACC
GACGGGCTGG AGGTCACGCC CATGCTGCTG CTGGGCCAGC CGGGCATCGG CAAGACGCAT
TTCGCCCGGC AGGTGGCCGA CCTGATCGGC ACCGGCATGA ACCTGGTCTC GATGGGTTCG
CTGACCGCCG GCTGGCTGCT GTCAGGCTCG GCGTCGCAGT GGAAGGGCGC CAAGCCGGGC
AAGGTATTCG AATCGCTGGT GGACGGCCGC TACGCCAACC CGGTAATCGT GATCGACGAG
ATCGACAAGG CCGCCAGCGA CGCCCAGTAC GACCCGCTGG GCTCGCTCTA CAGCCTGCTG
GAGCACGACA CGGCCTCTTC CTTCGTGGAC GAGTTCGCCG AAGTGCCCAT CGATGCCAGC
CAGGTGCTGT GGATCACGAC GGCCAACGAT GCGCGCGGCA TTCCCAACCC GATCCTGAAC
CGGATGAATG TGTTCGAGAT CCAGCCGCTC ACGCCCGGCC AGGCGCGGCA TATCGCACGG
CGCCTCTACC AGTCGATACG CGCCGGCCAC AACTGGGGGA CGCGCTTCGA TGACGCGCCG
TCAAGCGATG TGCTGGACAA GCTGGCCACC CTGGTGCCGC GTGAAATGCG CCGCGCCCTG
ATGGCCGCGT TCGGCAACGC GCGGCTGGCC AGCCGGGGCA TGCTGAAGGT CGATGACCTG
CCGCGCAGCG CGGCCAGCAA GGGCCGGATC GGGTTCATGC AATAG
 
Protein sequence
MESIQVVPQA PTFTLPVAKV RSVYQIADVE RKLGKLQNSE PREHDNLRAT YERMLERGPE 
RFQMKPSGIP EMAPLYDALP NFTDVLDDVR RHVALSHDST DGLEVTPMLL LGQPGIGKTH
FARQVADLIG TGMNLVSMGS LTAGWLLSGS ASQWKGAKPG KVFESLVDGR YANPVIVIDE
IDKAASDAQY DPLGSLYSLL EHDTASSFVD EFAEVPIDAS QVLWITTAND ARGIPNPILN
RMNVFEIQPL TPGQARHIAR RLYQSIRAGH NWGTRFDDAP SSDVLDKLAT LVPREMRRAL
MAAFGNARLA SRGMLKVDDL PRSAASKGRI GFMQ