Gene Pnap_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0357 
Symbol 
ID4689579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp354524 
End bp355741 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content64% 
IMG OID639833350 
Producthypothetical protein 
Protein accessionYP_980601 
Protein GI121603272 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.155454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCG CCTACCTGCC CTATGCCCTG GACTGGGCCA ATTTGCTGCT GCGCTGGGCG 
CATGTCATCA CCGCGATTGC CTGGATCGGC TCGTCGTTCT ACTTTGTTTT TCTCGACAGC
AGCCTGACCA GGCCGGTTGA TCCCGACCTA GTTGCAAAGG GCGTCGATGG CGAGTTGTGG
GCGGTGCATG GCGGCGGCTT CTACCACCCG CAAAAATACA TGGTGGCGCC CCAACAGATG
CCTGACAACC TGCACTGGTT TTACTGGGAG GCCTACTCGA CCTGGCTGAC CGGCTTTGCC
CTGTTCACGG TGCTTTACCT GTTCAATGCC GCGACCTTTC TGGTGGACAA GAACATTTAC
GACTGGTCGG CCGGTGCGGC GATTGCTGCC GCGCTGGGCT TTCTGGTGGC CGGCTGGGGG
GTGTACGACA CGGTCTGCCG GGTGTTCGGC CAGAAAAAAA ACGGCGACCT GATCGTCGGC
GCGGGCCTGC TGGTGTTTGT CGTTTTTGCC TCGTGGCTGG CCTGCCAGCT GTTTGCCGGG
CGGGCCGCGT TCCTGCTGGT CGGCGCGATG CTGGCCACCG CCATGAGCGC CAACGTCTTC
GTCTGGATCA TTCCGGGCCA GCGCAAGGTG GTGGCGCAGC TCAAGGCCGG GCAGCCGGTC
AATCCGGTCT ATGGCTGGCG CGCCAAGCAG CGCAGCGTTC ACAACACCTA TTTCACGCTG
CCGGTGCTGA TCGCGATGCT GTCGAACCAC TACGGCTGGC TGTCCGTGGG CGCGCAGAAC
TGGCTGGTGC TGGTGCTCTT GATGCTGGCC GGCGCGCTGA TCCGCCACAG TTTCGTGGCC
CGCCACAAGG CCGGGGTGCA GGGCAGGCGT GCGCCCTGGG AATACGCTGT TGCGGGCACG
GTGATGCTGG CTGGCCTGGT GATCTGGATG GCGCCAGCGC CGCCGTCGGC CGCCGCCATC
GCCGCAGCCG CCAAACCAGC CGGTTTTGCC GAGGTGAAAT CGGTGATCGA CCAGCGCTGC
GTGATGTGCC ACAACGCGCA GTTGCAAAAC AAGGGCATTG CGCTGCACAC GCCCGAATTG
CTCGGGCAGA ACGCGCAGGC GGTCTATCAG CAGGCTGTCG TGCTCAGGCT CATGCCCTTC
AACAATGCCA CGCAGATCAC CGAAGACGAG CGCGCCGTGA TCAAGCGCTG GTTTGAAGCG
GGCGCGCCGG TGAACTGA
 
Protein sequence
MMSAYLPYAL DWANLLLRWA HVITAIAWIG SSFYFVFLDS SLTRPVDPDL VAKGVDGELW 
AVHGGGFYHP QKYMVAPQQM PDNLHWFYWE AYSTWLTGFA LFTVLYLFNA ATFLVDKNIY
DWSAGAAIAA ALGFLVAGWG VYDTVCRVFG QKKNGDLIVG AGLLVFVVFA SWLACQLFAG
RAAFLLVGAM LATAMSANVF VWIIPGQRKV VAQLKAGQPV NPVYGWRAKQ RSVHNTYFTL
PVLIAMLSNH YGWLSVGAQN WLVLVLLMLA GALIRHSFVA RHKAGVQGRR APWEYAVAGT
VMLAGLVIWM APAPPSAAAI AAAAKPAGFA EVKSVIDQRC VMCHNAQLQN KGIALHTPEL
LGQNAQAVYQ QAVVLRLMPF NNATQITEDE RAVIKRWFEA GAPVN