| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0355 |
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| Symbol | |
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| ID | 4689520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 353046 |
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| End bp | 353999 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833348 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_980599 |
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| Protein GI | 121603270 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.949726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0556603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCA ACTACCCACG CGACCTGGCC GGCTACGGCC GCAACCCGCC CCATGCCAAC
TGGCCCGGCC GCGCCCGCAT CGCGGTGCAG TTCGTTTTGA ATTACGAGGA AGGCGGGGAA
AATTCCGTGC TGCACGGCGA CGCCGGCAGC GAGCAATTCC TGTCCGAGAT GTTCAACCCG
CCCGCCTTTC CCGACCGCCA CCTGAGCATG GAGGGCATTT ACGAATACGG CGCCCGCGCC
GGCGTGTGGC GGCTGCTGCG CGAATTCGAA AAGCGCGGCC TGCCGCTGAC GGTGTTCGGC
GTTGGCATGG CGCTGGAACG CTGCCCGGAC GTGGCGGCGG CATTCATGGA ACTCGGCCAT
GAAATCGCCT GCCACGGCTG GCGCTGGATC AGCTACCAGA ATGTGGACGA AGCCACCGAG
CGCGAACACA TGGCACGCGG CATGCAGGCC ATCGAACGCC TGACCGGCGA GCGGCCGCTG
GGCTGGTACA CCGGCCGCGA CAGCCCCAAC ACGCGCCGGC TGGTGGCCGA TCATGGCGGC
TTCGAGTACG ACAGCGACTA CTACGGCGAC GACCTGCCGT TCTGGCTGCA GGTCGAGAAA
ACCGATGGTT CGCTGGCGCC GCAGCTGGTC GTTCCCTACA CGCTGGACAC CAACGACATG
CGTTTTGCGC TGCCGCAGGG CTTTTCGCAG GGCGACGATT TCTTCACCTA CCTGCGCGAC
AGCTTTGACG TGCTGTACGC CGAGGGCGAG GAGCGGCCGG CCATGCTGAG CATCGGCATG
CACTGCCGCA TCCTGGGCCG CCCCGGCCGC CTGCGCGCGC TGCAGCGTTT CCTCGACCAT
ATCGAGCAGC ACGACCGCGT CTGGGTGACC CGGCGCATCG ACATCGCCCG CCACTGGAAA
CAGGTGCATC CCTTCAACCC CGAAACCTCC TTTGTCTGGC GCGCTTGCAA ATGA
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| Protein sequence | MPSNYPRDLA GYGRNPPHAN WPGRARIAVQ FVLNYEEGGE NSVLHGDAGS EQFLSEMFNP
PAFPDRHLSM EGIYEYGARA GVWRLLREFE KRGLPLTVFG VGMALERCPD VAAAFMELGH
EIACHGWRWI SYQNVDEATE REHMARGMQA IERLTGERPL GWYTGRDSPN TRRLVADHGG
FEYDSDYYGD DLPFWLQVEK TDGSLAPQLV VPYTLDTNDM RFALPQGFSQ GDDFFTYLRD
SFDVLYAEGE ERPAMLSIGM HCRILGRPGR LRALQRFLDH IEQHDRVWVT RRIDIARHWK
QVHPFNPETS FVWRACK
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