| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0354 |
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| Symbol | |
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| ID | 4689506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 351271 |
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| End bp | 353049 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833347 |
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| Product | putative bifunctional OHCU decarboxylase/allantoate amidohydrolase |
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| Protein accession | YP_980598 |
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| Protein GI | 121603269 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
[COG3195] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family
[TIGR03164] OHCU decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.584066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0196277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA CCTTGGACCA GCTCAACGCC GCCTCGCAGG CCGAATTCAC GCAGCTGCTG
GACGGCAGCT ATGAACATTC GCCGTGGATC GCGGCGCAGG CCTGGGCGCA GCGCCCGTTC
GCCAGCCTGG CGCAGCTCAA GCTGGCGCTG GTGCGGGTCG TGCGCGAGTC CGGCCGGGAG
GCGCAACTCG CGCTGATCCG CGCCCACCCT GAACTCGCCG GCAAGGCGAT GCTGAGCAAA
ACCCTGACGG CGGAATCAAG CCATGAACAG GGCAAGGCCG GCCTGAGCAA CTGCACGCCA
GCGGAATTCG CACGGATTCA CCAGCTCAAT GCCAACTACA ACGCAAAGTT CGGTTTTCCC
TTCATCCTGG CGGTGCGCGG CCCGCGCGGC TTGGGGCTGG CCAAGCCAGA GATTATTGCC
ACCTTTGCGC GCCGGCTGGA CAACCCTCCC GATTTCGAGC TGGCCGAGGC CTTGCGCAAC
ATCCACCGCA TTGCCGAAAT CCGTCTCAAT GACAAATTCG GCCACTCGCC CGACCTGGGC
AATTTGGTCT GGGACTGGGC CGAGCAGCTC GGCACCCACA GCGATCCGGG CTATGCTGAG
CGCGGCGAAC TCACCGTGAC CTACCTGACC GACGCGCACC AGGCCTGCGC CCGGCAGCTG
GCACACTGGA TGCGGGACGA CTGCAGCTTC GACGAAGTGT CGATTGACGC CGTCGGCAAT
GTTGTCGGCA TCTACCACGG CAGCGACCCG CAGGCCAGGC GCCTGTTGAC CGGCTCGCAC
TACGACACGG TGCGCAACGG CGGCAAGTAC GACGGACGGC TGGGGATTTT CGTGCCGATG
GCCTGCGTTC GTGAACTGCA GCGCCAGGGC CGGCGCCTGC CGTTTGGCCT GGAAGTCGTC
GGGTTCGCCG AAGAGGAAGG CCAGCGCTAC AAGGCAACCT TCCTCGGCTC GGGCGCGCTG
ACCGGCCATT TCGATGCGGC CTGGCTGGAC CAGAAAGACG CCGACGGCAT CACGATGCGC
GAAGCCATGA CGCAGGCCGG CTTGCGCATC GACGACATCC CCGCGCTCCG GCGCGACCCG
GCCCGCTACC TCGGCTTTGT CGAGGTGCAT ATCGAGCAGG GGCCGGTGCT CAACGCGCTG
GACCTGCCGC TGGGCGTGGT CACCTCCATC AACGGCAGCG TGCGTTACGT CGGCGAGATC
ATCGGCATGG CCAGCCATGC CGGCACGACG CCGATGAACC AGCGCCGCGA TGCGGCCACG
GCGGCGGCGG AACTCGCGCT CTACGTCGAG AAGCGCGGCG GCAGTGCAGA GAACCTCGTG
GCCACCGTCG GTATGCTCGA AGTGCCGGGC GGCTCGATCA ACGTGGTGCC GGGGCGTTGC
AAATTCAGCC TGGACATTCG CGCGACCACC GATGAAGTGC GCGACGCCTG CGCCGCCGAC
ATCGTCCATG AGCTGCAAGC CCTTTGCCAG CGGCGCGGCC TGCATTACCG GCTCGAAGAA
ACCATGCGCG CCGCCGCCGC GCCCAGCGCG CGCGCTTGGC AGCAGCGCTG GGAGCGGGCC
GTCGAAGCGC TCGGCCTGCC GGTGTTCCGC ATGCCCAGCG GCGCCGGCCA TGATGCGATG
AAACTGCACG AAATCATGCC CCAGGCGATG CTGTTCGTTC GCGGCCTGAA CGCCGGCATC
AGCCACAACC CGCTCGAAGC CATCACCAAC GACGACGCCG AGCTGTGCGT GCGCGCCTTC
CAGAACCTGC TCGATCAACT TGCCACGGAA TTTCCATGA
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| Protein sequence | MTITLDQLNA ASQAEFTQLL DGSYEHSPWI AAQAWAQRPF ASLAQLKLAL VRVVRESGRE
AQLALIRAHP ELAGKAMLSK TLTAESSHEQ GKAGLSNCTP AEFARIHQLN ANYNAKFGFP
FILAVRGPRG LGLAKPEIIA TFARRLDNPP DFELAEALRN IHRIAEIRLN DKFGHSPDLG
NLVWDWAEQL GTHSDPGYAE RGELTVTYLT DAHQACARQL AHWMRDDCSF DEVSIDAVGN
VVGIYHGSDP QARRLLTGSH YDTVRNGGKY DGRLGIFVPM ACVRELQRQG RRLPFGLEVV
GFAEEEGQRY KATFLGSGAL TGHFDAAWLD QKDADGITMR EAMTQAGLRI DDIPALRRDP
ARYLGFVEVH IEQGPVLNAL DLPLGVVTSI NGSVRYVGEI IGMASHAGTT PMNQRRDAAT
AAAELALYVE KRGGSAENLV ATVGMLEVPG GSINVVPGRC KFSLDIRATT DEVRDACAAD
IVHELQALCQ RRGLHYRLEE TMRAAAAPSA RAWQQRWERA VEALGLPVFR MPSGAGHDAM
KLHEIMPQAM LFVRGLNAGI SHNPLEAITN DDAELCVRAF QNLLDQLATE FP
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