| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0353 |
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| Symbol | |
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| ID | 4689493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 350042 |
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| End bp | 351274 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833346 |
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| Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_980597 |
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| Protein GI | 121603268 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.117081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0085825 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCTTG AGAACCACAA CACCGCGCTT GACGCCTGGA TCGACGCCCA TTTCGACGAA
GAAGTGCAAT TTCTGCAGGC GCTGGTGCGC GTGCCCACCG ACACGCCACC GGGCAACAAT
GCGCCGCACG CCGAGCGCAC CGCCGAACTG CTCGAAAACT TCGGCTTCGA AGTGGAAAAA
TACCCGGTGC CCACGCAGGC AGTGAAAGAT TACGGGCTCG AATCACTCAC CAACCTGGTC
GTTCGCCGCC AGTACGGCCC CGGCCCGGTC ATTGCCCTGA ATGCCCACGG CGACGTGGTG
CCGCCCGGCG ATGGCTGGAC ACACGACCCG TATGGCGCCG AGATCGTGGA CGGCAAGCTC
TATGGCCGGG CGTCGGCCGT GAGCAAAAGC GATTTCGCCA GCTACACCTT CGCCGTCCGC
GCGCTTGAAG CGCTGGGTCT GCCGCTCCAG GGCGGCATCG AGTTGCTGTT CACCTATGAC
GAGGAATTCG GCGGCGAACT CGGCCCCGGC TGGCTGCTGA AAAACAGGCT CAGCCGGCCC
GACCTCTTGA TCGCCGCCGG CTTCAGCTAC CAGGTCATCA CCGCGCACAA CGGCTGCCTG
CAGATGGAAG TGACCGTGCA CGGCAAGATG GCCCATGCCG CGATTCCCGA CACCGGCATC
GACGCGCTGC AGGGCGCGAC CGCCATCCTC ACGGCGCTGT ATTTGCAAAA CCAGCACTAC
CAATCCATCA CCTCCAAAGT CGAAGGCATC ACGCACCCCT ACCTCAACGT CGGCCGCATC
GAAGGCGGCA CCAACACCAA TGTGGTGCCC GGCAAGGTCA CGCTCAGGCT GGACCGCCGC
ATGATCCCCG AGGAAAACCC CGCCGAGGTC GAAGCCGAAG TGCGCCGCGT GATTCTTGAT
GCCGCCGCGA CCGTGCCCGG CATCACGGTC GAGATCAAAC GCCTGCTGAT GGCCGGAGCG
TGGAAACCCG ACAATCGCAA TGCCGCGCTG GTGCAGGCGC TGCAAAAGCA TGGCGAAGCG
GTCTTCGGCG AGCCCATTCC CACATCAGGC ACGCCGCTGT ACACCGACGT GCGCCTGTTC
GGCGCGGCCG GCATTCCGGC AGCCATTTAC GGCGCCGGCC CGCGCACGGT GCTTGAAAGC
AACGCCAAGC GCGCCGACGA GCACCTGGTC CTCGAAGACC TGCGCCGCGC GACCAAGGTG
GTGGCGCGCA CGCTGCTGGA GTTGCTGCAG TAA
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| Protein sequence | MTLENHNTAL DAWIDAHFDE EVQFLQALVR VPTDTPPGNN APHAERTAEL LENFGFEVEK
YPVPTQAVKD YGLESLTNLV VRRQYGPGPV IALNAHGDVV PPGDGWTHDP YGAEIVDGKL
YGRASAVSKS DFASYTFAVR ALEALGLPLQ GGIELLFTYD EEFGGELGPG WLLKNRLSRP
DLLIAAGFSY QVITAHNGCL QMEVTVHGKM AHAAIPDTGI DALQGATAIL TALYLQNQHY
QSITSKVEGI THPYLNVGRI EGGTNTNVVP GKVTLRLDRR MIPEENPAEV EAEVRRVILD
AAATVPGITV EIKRLLMAGA WKPDNRNAAL VQALQKHGEA VFGEPIPTSG TPLYTDVRLF
GAAGIPAAIY GAGPRTVLES NAKRADEHLV LEDLRRATKV VARTLLELLQ
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