Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0349 |
Symbol | |
ID | 4689439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 344375 |
End bp | 345706 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639833342 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_980593 |
Protein GI | 121603264 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0119612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00162584 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGAGG GGAACGCATT CACGCTGGGT ATCCTGATCA TTGGCTTGTT GCTGATTATC ATGACGATGG CCAGTTCCTT CCTCTCCCGT TTGCCACTGA GCGCCGCCAT GCTTTATCTC GGGGTCGGCA TCGCCATCGG TCCGCTGGGC CTGGGATTGC TCCAGATCGA TGCCCTGGAA AACAAGGTGC TGCTGGAGCG GGTAACTGAA ATTGCCGTAT TGATTTCACT TTTCACCGCC GGTATGAAGC TCGAATTGCC GCTGCGCGAC CGGCGCTGGC GAATCCCGGT GCAACTGGCC ACTGTCTCCA TGATCGTGAC CGTGGGTCTG ATTACGGCGC TGGGTTTCTA TGGACTGGGC CTGTCGCTAG GGGCCGCAGT GCTGCTGGGG GCTATCTTGG CACCGACCGA CCCGGTTCTC GCATCCGATG TGCAAGTGTC CAACCCCGGT GACCGCGACC GGCTGCGCTT TGGCCTGACC GGCGAAGGCG GGCTGAACGA CGGCACGGCG TTTCCTTTTG TCATGCTGGG ACTGGGCTTG CTGGGCGTGC ATGAACTGGG CGAAGGCGGC TGGCGGTGGT GGATGGTTGA TGTGCTGTGG GCCATCACAG CCGGCCTGGG CCTGGGCTAC CTGCTGGGCA CGCTGGTGGG CCGCGCCATC ATCTATTTGC GTGTACGCCA CCGGGAAGCC CTGAGGTCTG ACGAATTCAT CGCACTCGGC CTGATTGGAC TGACCTATGG CGTCGCCCTG CTCTGCCACA GCTACGGTTT TTTGGCGGTC TTCGCCGCTG GACTGGCATT GCGGCGTATT GACGAGGGCA AATCAGCACG GCCTTCCGAG CAGGCTGAGA TTCCGGAATC CGTATCCGGA TTGAGCCCTG ACGAGCAGGC TGCATCCGGT GCCGAAGCGC CAGCCAACAT GATGAATGCA GTGCAGCGCT TTAACAGCCA GCTTGAAAGT TTTGTCGAGG TCGGGATTGT TCTGGCGGTC GGTGTGCTGC TGGCAACGGT TGAGTTTGAA CGCGACGCAC TGTGGTTCGT TCCTGTGCTG TTTGTGCTGG TTCGCCCGCT GGCGGTTTAC ATGGGCCTGC TCGGCACCCG AGTCAAGGGC TCGCAGCGGA ATTTGATAAG CTGGTTTGGG ATACGCGGCA TCGGTTCGCT GTATTACCTG CTTTATGCCA TCAACCATGG CATTCAGCCG GTGCTGGCCG ACCGTCTGCT GTCGATGGCG CTATCCGTAG TGGTTGCATC AGTCATTGCG CATGGTATTT CAGTCACGCC ACTGATGACG CATTATGAGG CGCGCAAGAC CGCTAGAGCG GCTTCACCCT GA
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Protein sequence | MIEGNAFTLG ILIIGLLLII MTMASSFLSR LPLSAAMLYL GVGIAIGPLG LGLLQIDALE NKVLLERVTE IAVLISLFTA GMKLELPLRD RRWRIPVQLA TVSMIVTVGL ITALGFYGLG LSLGAAVLLG AILAPTDPVL ASDVQVSNPG DRDRLRFGLT GEGGLNDGTA FPFVMLGLGL LGVHELGEGG WRWWMVDVLW AITAGLGLGY LLGTLVGRAI IYLRVRHREA LRSDEFIALG LIGLTYGVAL LCHSYGFLAV FAAGLALRRI DEGKSARPSE QAEIPESVSG LSPDEQAASG AEAPANMMNA VQRFNSQLES FVEVGIVLAV GVLLATVEFE RDALWFVPVL FVLVRPLAVY MGLLGTRVKG SQRNLISWFG IRGIGSLYYL LYAINHGIQP VLADRLLSMA LSVVVASVIA HGISVTPLMT HYEARKTARA ASP
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