Gene Pnap_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0349 
Symbol 
ID4689439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp344375 
End bp345706 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content60% 
IMG OID639833342 
Productsodium/hydrogen exchanger 
Protein accessionYP_980593 
Protein GI121603264 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0119612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00162584 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGAGG GGAACGCATT CACGCTGGGT ATCCTGATCA TTGGCTTGTT GCTGATTATC 
ATGACGATGG CCAGTTCCTT CCTCTCCCGT TTGCCACTGA GCGCCGCCAT GCTTTATCTC
GGGGTCGGCA TCGCCATCGG TCCGCTGGGC CTGGGATTGC TCCAGATCGA TGCCCTGGAA
AACAAGGTGC TGCTGGAGCG GGTAACTGAA ATTGCCGTAT TGATTTCACT TTTCACCGCC
GGTATGAAGC TCGAATTGCC GCTGCGCGAC CGGCGCTGGC GAATCCCGGT GCAACTGGCC
ACTGTCTCCA TGATCGTGAC CGTGGGTCTG ATTACGGCGC TGGGTTTCTA TGGACTGGGC
CTGTCGCTAG GGGCCGCAGT GCTGCTGGGG GCTATCTTGG CACCGACCGA CCCGGTTCTC
GCATCCGATG TGCAAGTGTC CAACCCCGGT GACCGCGACC GGCTGCGCTT TGGCCTGACC
GGCGAAGGCG GGCTGAACGA CGGCACGGCG TTTCCTTTTG TCATGCTGGG ACTGGGCTTG
CTGGGCGTGC ATGAACTGGG CGAAGGCGGC TGGCGGTGGT GGATGGTTGA TGTGCTGTGG
GCCATCACAG CCGGCCTGGG CCTGGGCTAC CTGCTGGGCA CGCTGGTGGG CCGCGCCATC
ATCTATTTGC GTGTACGCCA CCGGGAAGCC CTGAGGTCTG ACGAATTCAT CGCACTCGGC
CTGATTGGAC TGACCTATGG CGTCGCCCTG CTCTGCCACA GCTACGGTTT TTTGGCGGTC
TTCGCCGCTG GACTGGCATT GCGGCGTATT GACGAGGGCA AATCAGCACG GCCTTCCGAG
CAGGCTGAGA TTCCGGAATC CGTATCCGGA TTGAGCCCTG ACGAGCAGGC TGCATCCGGT
GCCGAAGCGC CAGCCAACAT GATGAATGCA GTGCAGCGCT TTAACAGCCA GCTTGAAAGT
TTTGTCGAGG TCGGGATTGT TCTGGCGGTC GGTGTGCTGC TGGCAACGGT TGAGTTTGAA
CGCGACGCAC TGTGGTTCGT TCCTGTGCTG TTTGTGCTGG TTCGCCCGCT GGCGGTTTAC
ATGGGCCTGC TCGGCACCCG AGTCAAGGGC TCGCAGCGGA ATTTGATAAG CTGGTTTGGG
ATACGCGGCA TCGGTTCGCT GTATTACCTG CTTTATGCCA TCAACCATGG CATTCAGCCG
GTGCTGGCCG ACCGTCTGCT GTCGATGGCG CTATCCGTAG TGGTTGCATC AGTCATTGCG
CATGGTATTT CAGTCACGCC ACTGATGACG CATTATGAGG CGCGCAAGAC CGCTAGAGCG
GCTTCACCCT GA
 
Protein sequence
MIEGNAFTLG ILIIGLLLII MTMASSFLSR LPLSAAMLYL GVGIAIGPLG LGLLQIDALE 
NKVLLERVTE IAVLISLFTA GMKLELPLRD RRWRIPVQLA TVSMIVTVGL ITALGFYGLG
LSLGAAVLLG AILAPTDPVL ASDVQVSNPG DRDRLRFGLT GEGGLNDGTA FPFVMLGLGL
LGVHELGEGG WRWWMVDVLW AITAGLGLGY LLGTLVGRAI IYLRVRHREA LRSDEFIALG
LIGLTYGVAL LCHSYGFLAV FAAGLALRRI DEGKSARPSE QAEIPESVSG LSPDEQAASG
AEAPANMMNA VQRFNSQLES FVEVGIVLAV GVLLATVEFE RDALWFVPVL FVLVRPLAVY
MGLLGTRVKG SQRNLISWFG IRGIGSLYYL LYAINHGIQP VLADRLLSMA LSVVVASVIA
HGISVTPLMT HYEARKTARA ASP