| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0346 |
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| Symbol | rplQ |
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| ID | 4688866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 342759 |
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| End bp | 343160 |
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| Gene Length | 402 bp |
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| Protein Length | 133 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639833338 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_980590 |
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| Protein GI | 121603261 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.239558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000393302 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGACACG GACACGGACT ACGTAAATTA AACCGCACCA GCGAGCACCG CCTCGCCATG
TTGCGCAACA TGATGAATTC GTTGCTCCAG CACGAAGCCA TCAAGACCAC GCTGCCAAAA
GCCAAAGAGC TGCGCCGCGT GGTTGAGCCC ATGATTACCC TGGCAAAAAC GCCAACCCTG
GCCAACAAGC GCCTGGCATT CGACCGTCTT CGCGACCGCG ACATGGTTGT CAAGCTGTTT
GCTGAACTCG GCCCACGCTA CCAGACCCGT CCAGGCGGCT ACACCCGTAT CCTGAAGATG
GGTTTCCGTG TTGGCGACAA TGCGCCTATG GCTTTGGTTG AACTGGTTGA TCGTCCTGAT
GTTTCGGAAG AAATTAAAGA TGACGCAGCA GCTGCAAAGT AA
|
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| Protein sequence | MRHGHGLRKL NRTSEHRLAM LRNMMNSLLQ HEAIKTTLPK AKELRRVVEP MITLAKTPTL
ANKRLAFDRL RDRDMVVKLF AELGPRYQTR PGGYTRILKM GFRVGDNAPM ALVELVDRPD
VSEEIKDDAA AAK
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