| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0340 |
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| Symbol | secY |
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| ID | 4688766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 338518 |
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| End bp | 339825 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639833332 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_980584 |
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| Protein GI | 121603255 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.670272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000594925 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCAACCA ACTCGGCTCA AATTGCAAAA ACCGGCAAGT TCGGCGACTT GCGCAACAGG
CTTGTGTTTT TGCTGCTGGC GCTGGTCGTG TACCGTGTCG GTGCGCATAT TCCAGTTCCA
GGCATTGACC CCGGTCAATT GAAGGAGCTG TTCAAGGGCC AGCAGGGCGG CATATTGAAC
TTGTTCAATA TGTTCTCCGG TGGTGCCTTG TCAAGATTCA CGGTGTTTGC CTTGGGCATC
ATGCCCTACA TCTCGGCTTC CATCATCATG CAGCTGCTGA CTTATGTGGT TCCCACATTC
GAGCAGATGA AAAAAGAGGG TGAATCGGGC AGGCGCAAGA TCACGCAGTA CACACGTTAC
GGAACGCTAG GGCTTGCCCT GTTCCAGTCG ATGGGTATTG CCGTTGCGCT GGAAAGCTCG
CCTGGTTTGG TGTTGATGCC TGGTTTCGGG TTCAGGATGA CAGCAGTGTT CAGTCTGACA
GCGGGAACAA TGTTTCTGAT GTGGTTGGGC GAGCAGATTA CTGAGCGTGG CTTGGGCAAC
GGTATCTCAA TCCTGATTTT TGCAGGTATT GCGGCTGGTT TGCCAAGTGC ACTCGGTGGT
TTACTGGAAC TGGTGCGTAC TGGTGCCATG AGCATATTGA TTGCCATCGT GATCGTTGCG
GTTGTTGTGC TGGTAACGTA CTTTGTTGTG TTTGTTGAGC GAGGTCAACG CAAGATTCTT
GTGAACTATG CCAGGCGACA AGTTGGTAAC AAGGTTTATG GTGGACAGTC ATCGCATTTG
CCTCTGAAGC TGAACATGGC AGGCGTTATT CCTCCCATTT TTGCTTCCTC GATTATTTTG
CTGCCAGCAA CGGTGGTGGG GTGGTTTAGC ACGGGTGAAA GCATGCGCTG GTTGAAAGAC
ATCGCCAGTA CGCTGACGCC GGGTCAGCCG ATTTATGTGA TGCTGTACGC CAGTGCGATA
ATCTTTTTCT GTTTCTTTTA CACAGCTTTG GTATTTAACA GCCGTGAAAC TGCAGACAAC
CTGAAAAAGA GCGGGGCGTT CATTCCGGGA ATTCGTCCAG GTGATCAGAC GGCACGCTAC
ATCGACAAGA TTCTGGTTCG CCTGACATTG GCAGGCGCGG TTTACATCAC CTTCGTATGT
TTGCTGCCCG AGTTTTTGAT TTTAAAGTAC AACGTACCGT TTTATTTTGG TGGAACGTCG
TTGATGATTA TTGTTGTGGT CACTATGGAT TTCATGGCTC AGGTTCAGAA CTACATGATG
TCGCAGCAGT ATGAGTCGTT GCTGAAAAAG GCCAATTTCA AGACGTGA
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| Protein sequence | MATNSAQIAK TGKFGDLRNR LVFLLLALVV YRVGAHIPVP GIDPGQLKEL FKGQQGGILN
LFNMFSGGAL SRFTVFALGI MPYISASIIM QLLTYVVPTF EQMKKEGESG RRKITQYTRY
GTLGLALFQS MGIAVALESS PGLVLMPGFG FRMTAVFSLT AGTMFLMWLG EQITERGLGN
GISILIFAGI AAGLPSALGG LLELVRTGAM SILIAIVIVA VVVLVTYFVV FVERGQRKIL
VNYARRQVGN KVYGGQSSHL PLKLNMAGVI PPIFASSIIL LPATVVGWFS TGESMRWLKD
IASTLTPGQP IYVMLYASAI IFFCFFYTAL VFNSRETADN LKKSGAFIPG IRPGDQTARY
IDKILVRLTL AGAVYITFVC LLPEFLILKY NVPFYFGGTS LMIIVVVTMD FMAQVQNYMM
SQQYESLLKK ANFKT
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