| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0332 |
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| Symbol | rplE |
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| ID | 4688152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 335119 |
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| End bp | 335658 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639833324 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_980576 |
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| Protein GI | 121603247 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000492925 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000510256 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCACGCT TGCAAGATCA ATACCGCGAG AAAATCGCGC CAGCCCTGAT TGAAAAATTC
GGCTACACGA CACCCATGCA GGTGCCGCGC ATCACCAAGA TCACGCTCAA CATGGGTGTG
AGCGAGGCGG TTGCCGACAA GAAAGTCATG GACAACGCCG TGGCCGACAT GGCCAAGATC
GCAGGCCAGA AGCCTGTGGT GACCAAGGCC AAGAAGGCCA TCGCCGGTTT CAAGATCCGC
GAAGACTTGC CGATTGGCTG CATGGTCACG CTGCGCGGCG TGCAGATGTA TGAATTCCTC
GACCGTTTCG TGACCGTGGC TTTGCCCCGC GTCCGTGACT TCCGCGGTAT TTCTGGTCGC
GCCTTCGATG GCCGCGGCAA CTACAACATC GGCGTTAAAG AGCAGATCAT TTTCCCTGAA
ATCGAGTACG ACAAGGTTGA CGCCTTGCGC GGTCTCAATA TCAGCATTAC CACAACGGCC
AAGACCGATG AAGAGTGCAA AGCGCTTCTC ACCGCCTTCC GTTTTCCGTT CAAGAACTGA
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| Protein sequence | MARLQDQYRE KIAPALIEKF GYTTPMQVPR ITKITLNMGV SEAVADKKVM DNAVADMAKI
AGQKPVVTKA KKAIAGFKIR EDLPIGCMVT LRGVQMYEFL DRFVTVALPR VRDFRGISGR
AFDGRGNYNI GVKEQIIFPE IEYDKVDALR GLNISITTTA KTDEECKALL TAFRFPFKN
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