| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0324 |
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| Symbol | |
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| ID | 4687345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 326904 |
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| End bp | 327860 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833316 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_980568 |
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| Protein GI | 121603239 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0489134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGA CCGAACTCAA ATACATAGTC GCCGTGGCCC GTGAAAAGCA CTTCGGCCGG
GGCGCTGAAG CCTGTCATGT CTCGCAGCCG ACGCTCAGCG TGGCGATCAA GAAGCTTGAA
GAAGAACTCC AGGTCAAGCT GTTCGAGCGC AATGCCAATG AAATCACCGT CACGCCGCTG
GGCGAGGAAA TCGTGCGCCA GGCGCAAAGC GTGCTGGAGC AGGCCGACAG CATCCGCGAG
ATCGCCCGGC GCGGCAAGGA TCCGCTGGCC GGCAGCCTGC GCCTGGGCGT GATCTACACC
ATCGGCCCCT ACCTGCTGCC CGACCTGGTG CGCCAGATCA TCGAGAAAAC GCCGCAGATG
CCGCTGATGC TGCAGGAGAA CTTCACCGTC AAGCTGCTGG AGGAACTGCG CACCGGCGAG
ATCGACTGCG CCATCCTGGC CGAGCCGTTT CCCGACACCA ACCTGGCGAT TGCGCCGCTG
TACGACGAGC CCTTCATGGC GGCGGTGCCG AGCAGCCACC CGCTGGCCGC GCGCACCAGT
GTGACGGCCG AGGAACTGAA GAAGGAAACC CTGCTGCTGC TGGGCACGGG CCACTGCTTT
CGCGACCATG TGCTGGAGGT CTGCCCCGAG TTCGCGCGTT TTTCCACCAG CGCCGAGGGC
ATCAGCAAGA GCTTTGAAGG CTCGTCGCTC GAAACTATCA AACACATGGT GGCCGCCGGC
ATGGGCATCA CGCTGGTGCC GCGCCTGGGC GTGCCCAAGT CGGCGCTGGC GCTAAGCGGC
CAGGATACGT CCGCGGACCA GCCTTCCTAC ATCCGCTACC TGCCGTTCGA GGGCCATGTG
CCGACGCGGC GCGTGGTGCT GGCCTGGCGC CGCAGCTTCA CCCGCTACGA AGCCATCGCC
GCGCTGCGCA ACGCGATTTA CGCGTGCGAG TTGCCCGGCG TCATCCGCCT GTCCTGA
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| Protein sequence | MTLTELKYIV AVAREKHFGR GAEACHVSQP TLSVAIKKLE EELQVKLFER NANEITVTPL
GEEIVRQAQS VLEQADSIRE IARRGKDPLA GSLRLGVIYT IGPYLLPDLV RQIIEKTPQM
PLMLQENFTV KLLEELRTGE IDCAILAEPF PDTNLAIAPL YDEPFMAAVP SSHPLAARTS
VTAEELKKET LLLLGTGHCF RDHVLEVCPE FARFSTSAEG ISKSFEGSSL ETIKHMVAAG
MGITLVPRLG VPKSALALSG QDTSADQPSY IRYLPFEGHV PTRRVVLAWR RSFTRYEAIA
ALRNAIYACE LPGVIRLS
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