Gene Pnap_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0322 
Symbol 
ID4686962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp324192 
End bp326339 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content67% 
IMG OID639833314 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_980566 
Protein GI121603237 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.732592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0359852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTTC CGGCTGCTTC CGCCCTTGAC CCGGCGCCGA AAACCGCCCT GCCCATGGCC 
GGCGCGGCGG ACAAGCCTGC CGCCAAAGCG CCGGCCAAGT CCCCGGCGCA AAAAGCCATG
GAAAAGCTCG GCCTGCGCCG CGACATTGAC CTGGCCCTGC ACCTGCCCCT GCGCTACGAG
GATGAAACCC GCATCACGCG ACTGGCCGAC GCGCGCGATG GCGAAGTGGT GCAGTTTGAA
GGCGAGGTGA CGCACAGCGA AGTCCTGATC CGCTCGCGGC GCCAGCTGCT GGTCACGGTC
GATGACGGCA GCGACACCTG CGTGCTGCGC TTCCTCAATT TCTACCCCTC GCACCAGAAA
ACGCTCAGCG TCGGCGCCTG GGTGCGGGTG CGCGGCGAGT TGCGCGGCGG CTTTCTGGGC
CGCGAGATGG TGCATCCGCA CTTCAAGCTG GCTGGCGGTG AACTGCCGGG CGCGCTGACG
CCGGTGTACC CGACCTCTGC CGGACTGCCC CAGGTCTATC TGCGCAAGGC GGTGCTCAGC
GGCCTGGCGC GGGCCGACCT CAGCGAGACG ATTCCCGCGC CATTTTTAAG CAAAAACATG
CCTTTGCGCT TGTCCAGCCT GCGTGAGGCG CTACAGTTTT TGCACCACCC GACGCCTGAT
GTGGCGCTGC AAACGCTCGA AGACCGCAGC CACCCGGCCT GGCAGCGCCT GAAGGCCGAG
GAGTTGCTGG CCCAGCAAAT CTCGCAATTG CAATCGCGCC GCGTGCGCGC CGCCATGCGC
GCGCCGGCCT TGAATGGCCC GGCGATGCGC GGCACGCACT GCACATTGCA GGAGCAGTTG
CTGGAGCGCC TGCCGTTTCG CCTGACCGGC GCGCAGCAGC GCGTCAGCGC GGAAATCGAG
GTCGATTTGA AAAAGAATGT GCCCATGCAC CGCCTGCTGC AGGGCGACGT GGGCGCGGGC
AAAACCGTGG TCGCCGCGCT GGCCGCCGCG CGCTGCATCG ACGCGGGCTG GCAGTGCGCG
CTGATGGCGC CGACCGAAAT CCTGGCCGAG CAGCATTTCA GCAAGCTCAT CAGCTGGCTC
GAACCCCTGG GCATCAAGAC CGCCCGGCTC ACCGGCAGCC AGAAACCCAA AGAGCGCCGC
GAGATGCTGG CGCTGGTCGA AAGCGGCGAG GCCGGGCTGG TCATCGGCAC GCACGCGGTG
ATCCAGTCCA AGGTGAAGTT CAAAAACCTG GCGCTGGCCA TCATCGACGA GCAGCACCGC
TTCGGCGTCG CCCAGCGCCT GGCGCTGCGC AGCAAGATGA CGCACGAGGG CCAGGAGCCG
CACCTGCTCA TGATGACCGC CACGCCGATT CCGCGCACGC TGGCCATGAG CTATTACGCC
GACCTGGATG TGTCCACGCT CGACGAACTG CCGCCCGGCC GCACGCCCAT CGTCACCAAG
CTGGTGAACG ATGCGCGGCG CGACGAGGTC ATCGCCCGCA TCCAGGCGCA GATTGCCCAG
GGCCGGCAGA TTTACTGGGT CTGCCCGCTG ATCGAGGAAA GCGAGTCCAT CGACCTGGTC
AACGCCACCC AGACGCATGC CGCGCTGAGC GAAGCCTTGC CCGGCGTGAT GGTCGGGCTG
CTGCACTCGC GCATGCCGCC AGCCGAGAAA AAGGCCGTGA TGAGCCTCTT CACCGAAGGC
GTGATGGCGG TCTTGGTCAG CACCACGGTG ATCGAGGTCG GTGTCGATGT GCCCAATGCG
TCGCTGATGG TGATCGAGCA TGCCGAACGC TTTGGCCTGT CGCAACTGCA CCAGTTGCGC
GGCCGGGTCG GGCGCGGCGC GGCGGCGTCG GCCTGCGTGC TGTTGTATTC GACCGGCGAT
GCGCCCCGGC TGGGCGAGGT GGCGCGCGCG CGGCTCAAGG CGATGGTCGA GACGAATGAC
GGCTTCGAGA TTGCCCGGCG CGACCTGGAC ATTCGCGGGC CGGGCGAGTT TTTAGGCGCG
CGCCAGTCGG GGGCTGCGAT GCTGCGCTTT GCTGATTTGC AGACCGATGC TGGATTGCTG
GCCTGGGCGC GGGAAGTGGC GCCGCTGATG CTGGACCAGT ACCCCGACCT GGCCGAGCGG
CATGTGCTGC GTTGGCTGGG GGGGAAGGCG GAGTTTTTGA AGGCTTGA
 
Protein sequence
MMLPAASALD PAPKTALPMA GAADKPAAKA PAKSPAQKAM EKLGLRRDID LALHLPLRYE 
DETRITRLAD ARDGEVVQFE GEVTHSEVLI RSRRQLLVTV DDGSDTCVLR FLNFYPSHQK
TLSVGAWVRV RGELRGGFLG REMVHPHFKL AGGELPGALT PVYPTSAGLP QVYLRKAVLS
GLARADLSET IPAPFLSKNM PLRLSSLREA LQFLHHPTPD VALQTLEDRS HPAWQRLKAE
ELLAQQISQL QSRRVRAAMR APALNGPAMR GTHCTLQEQL LERLPFRLTG AQQRVSAEIE
VDLKKNVPMH RLLQGDVGAG KTVVAALAAA RCIDAGWQCA LMAPTEILAE QHFSKLISWL
EPLGIKTARL TGSQKPKERR EMLALVESGE AGLVIGTHAV IQSKVKFKNL ALAIIDEQHR
FGVAQRLALR SKMTHEGQEP HLLMMTATPI PRTLAMSYYA DLDVSTLDEL PPGRTPIVTK
LVNDARRDEV IARIQAQIAQ GRQIYWVCPL IEESESIDLV NATQTHAALS EALPGVMVGL
LHSRMPPAEK KAVMSLFTEG VMAVLVSTTV IEVGVDVPNA SLMVIEHAER FGLSQLHQLR
GRVGRGAAAS ACVLLYSTGD APRLGEVARA RLKAMVETND GFEIARRDLD IRGPGEFLGA
RQSGAAMLRF ADLQTDAGLL AWAREVAPLM LDQYPDLAER HVLRWLGGKA EFLKA