Gene Pnap_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0306 
Symbol 
ID4690004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp306390 
End bp307733 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content68% 
IMG OID639833298 
Producthypothetical protein 
Protein accessionYP_980550 
Protein GI121603221 
COG category[S] Function unknown 
COG ID[COG4398] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCATA TTGAAGCCTT GGATCATCCC CTCAATTGTC CTTCGCACCT TATGAAACTC 
TTCCCCTACG GCCACGCCAC CCATCCGCAA TGGCAGATGG CCGCCGGCCT GGTGCTGGCG
CAACTGCGTG GCTACCTGGC CCTGCCAGAA TACGCCAGCG CACCGACGCT GGCGCTGCTC
TACATCACCG ACCACTATGT GCCCCAGGCG CAGGAAATCC TGGACCACCT GAGCGCCGAG
CTGCCCTTCA TCACCGACTG GAGCGGCGCG GTGGGCGTCG GCATTGCCTC GAACAACGTC
GAATATTTTG ATGAACCGGC GCTGGCCGTG ATGCTGTGCG AACTGCCGCA TGACCATTAC
CGCGTGTTTT CCGGCGTGTC GCCGCTGCCG CCGGCCCGCA GCGGCCTGTT CACCGCGCAC
ACCGCGCTGG TGCATGCCGA CGCGGCCACG CCCGATGTGG CCGAGTTGAT TGCCGAGATG
GCCGCGCGCA CCGAAAGCGG CTATGTCTTT GGCGGCCTGG CGTCCAGTCG CAGCGCGGTG
GTGCAGTTCG CGCTCAGCGG CCACGGCAAC CTGAAGGGGC AGGGCGCGGC CTGCGGGGTG
TTCAGCGGCG GCCTGAGCGG CGTGGCGTTT GCGCGCGATG CCTCGGGCGG CATGGGCCTG
ATGTCGCGTG TCACGCAAGG CTGCAAGCCG GTGTCAAGCA CCTACACCAT CACCGCCTGC
GACGCCAACG TGGTCATCGA ACTCGACGGC CAGCCGGCGC TGGAGGTGAT GCTGGCCGAC
CTGGGCGTGT CGCTTGAGCA GCCGCGCGAG GCGCTGGCCA GGGTGCGCAA CACGCTGGTC
GGCCTGAGCC GCGATGCGGA TTTTCCCAAC GATGCGGTCC GCCAGCGCTC GGGCCAGTTT
GGCGCCGACG TGCTGGTGCG CCACCTGATC GGGCTGGACC CGGCGCGACA GGGCATTGCC
ATTGCCGACA CGGTCAGCGT CGGCATGAAG CTGGCTTTTT GCGAACGCAA TGCCCAGGCC
GCGCGCGCTG ATCTGGTGCG CATCTGCGCC GAAATCCGCG AAGAGCTGGA GCCCGAGGAG
CAGACGCTGG AAGTGGCCAG CGCCCTGAAC CTGCCCGAGG CGCAATCCGC GCCGCACCCC
GCCCGGCGCA TTGCCGGCGC CGTTTACGTC AGCTGCGCGG GACGCGGCGG ACCGCATTTC
GGCGCGCCCA GCGCCGAGCT GCAAATCGTG CGGCACGCCT TGGGCGATGT GCCGCTGGTC
GGGTTTTTTG CCGGCGGCGA GATCGCCCGC AACCACCTGT ATGGCTACAC CGGCGTGCTG
ACTGTGTTCA CCTCGGCCGA TTGA
 
Protein sequence
MCHIEALDHP LNCPSHLMKL FPYGHATHPQ WQMAAGLVLA QLRGYLALPE YASAPTLALL 
YITDHYVPQA QEILDHLSAE LPFITDWSGA VGVGIASNNV EYFDEPALAV MLCELPHDHY
RVFSGVSPLP PARSGLFTAH TALVHADAAT PDVAELIAEM AARTESGYVF GGLASSRSAV
VQFALSGHGN LKGQGAACGV FSGGLSGVAF ARDASGGMGL MSRVTQGCKP VSSTYTITAC
DANVVIELDG QPALEVMLAD LGVSLEQPRE ALARVRNTLV GLSRDADFPN DAVRQRSGQF
GADVLVRHLI GLDPARQGIA IADTVSVGMK LAFCERNAQA ARADLVRICA EIREELEPEE
QTLEVASALN LPEAQSAPHP ARRIAGAVYV SCAGRGGPHF GAPSAELQIV RHALGDVPLV
GFFAGGEIAR NHLYGYTGVL TVFTSAD