Gene Pnap_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0301 
Symbol 
ID4687983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp300238 
End bp301428 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content68% 
IMG OID639833293 
Producthypothetical protein 
Protein accessionYP_980545 
Protein GI121603216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCTG ACATGCTGAG TTTCAGCCCC CCGATGACAG GCCAGATTGT GCCGTGGCGC 
ACCCTGGGCC TGCTGGCGGT GCTGGTGCTG CTGGCGCATG CGCTGCTGCT GCAAACCCGG
CCGGCGCGCC TTGGCCCGGC GCCGGAGCCC GTTCAGAAGC GCGTCCCGGC ATTGATCACC
CGAAGCATTC CCCCCGCGCC TGCCGCCAGC CCGCTGCCGG CTGTGGCAAA GCCAGCCGTT
CAACCCCCGC CCAAACCGGC CGCCAAGCCT GTCAAGAAGC CTGTTTTCAA GCAAAATAGG
CCTTTTGCGC ACGACCAGCC TGCGCAATCA GCTACAAATT CAATAGCAGA ACCAGTCCAG
GAACCCGGCA GCGCCGAGGC GCCGCCTGCC CCACAAGCGC CAGACAGCCT GGCGCCCTTG
CCTTCGGCGC CAGCGACTGA AACCGCACCA GAACCTCCCG CCGACAGCGA CACCGCGACC
GCCGCCACGC CGCCCGCCAG CGCTGCGGCA GCGCCTTCGC CACCGCAGCC GAAGCAGACG
CCGGTCACCG CCATGGCGCT TCCCGCCAGC GCCCAGCTTG AATACAAGAT GACCGGCAGC
GCCAAGGGCC TGACCTACCA CGCCCGGGGC GAACTTTCCT GGCAAAACAG CGGCGGCAGC
TACCATGCCA GCATGACCGC CAAAGCGCTG TTTCTCGGCT CGCGCACCTT GAGCAGCACC
GGCCAGATCA GCGCCCAGGG CCTGGCGCCC AGCCGCTTTT CCGACAAGTC GCGCAGCGAG
GTGGCGGCCC ATTTCGAGCC CGACAAGGGC CAGATCAGCT TCAGCGCCAA CACGCCCTCC
GTGCCGTGGA CGCAGGGCGC GCAAGACCGG GTGAGCGTGT TCCTGCAACT GGGCGGCATG
CTGGCGGGCA ACCCGGCCGG TTTTCCGGTG GGCGCTACCC TTTCAACGCT CACGGTCGGG
CCGCGCGATG CCGACCACTG GACCTTCCTG GTCGAGAAAG AGGAGCTGCT CAGCCTGCCC
TTCGGCGACC TGGCAACGCT CAAGCTGTCG CGCCAGCCCA GGCGCGAGTA CGACCAGAAG
GTTGAAGTCT GGTATGCCCC GGCGCTGGGC TACCTGCCGG TGCGCAACCA GATCACCCAG
GCCAACGGCG ATTTCGTGGA CCAGCAACTG AGCGACCTGA GCCATCCCTG A
 
Protein sequence
MRSDMLSFSP PMTGQIVPWR TLGLLAVLVL LAHALLLQTR PARLGPAPEP VQKRVPALIT 
RSIPPAPAAS PLPAVAKPAV QPPPKPAAKP VKKPVFKQNR PFAHDQPAQS ATNSIAEPVQ
EPGSAEAPPA PQAPDSLAPL PSAPATETAP EPPADSDTAT AATPPASAAA APSPPQPKQT
PVTAMALPAS AQLEYKMTGS AKGLTYHARG ELSWQNSGGS YHASMTAKAL FLGSRTLSST
GQISAQGLAP SRFSDKSRSE VAAHFEPDKG QISFSANTPS VPWTQGAQDR VSVFLQLGGM
LAGNPAGFPV GATLSTLTVG PRDADHWTFL VEKEELLSLP FGDLATLKLS RQPRREYDQK
VEVWYAPALG YLPVRNQITQ ANGDFVDQQL SDLSHP