| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0299 |
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| Symbol | |
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| ID | 4687456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 298517 |
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| End bp | 299653 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639833291 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_980543 |
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| Protein GI | 121603214 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TGCTTGCCGG CCTGATCGCG TCCGCCACAC TGTTTGCCGG GGCTTCCGTC
CAGGCTGTCG ATGGCGTCAC GGCCCGACAA CTATTGATCG GCCAGAGCAT CACCCTGGAG
GGTGGAAAAA ACGACTACGG CACGGCCGTG CTGGCGGGCA TGCAAACCTA CCTGAGCGCG
GTCAACGCAC GCGGCGGTGT CAATGGCCGC CAGGTGGTGC TGAAAACGCT GGACGATGAC
AACAAAAGCG CAAAGGCCGA AACCAACGCA CGCCAGCTGG TCGAGAAAGA CAAGGTTTTC
GCGCTGTTCG GCTCCATCGA GGGTGGCCCG TCGGTGGCCG TGATGAAGGC GGCGAATGAA
CTCAAGGTGC CTTTTTTCGG CCCCATGGCG GGCTCGCCGA CCCTGCGCCG GCCCTATCAG
CCGCTGGTGT TCCCGGTTCG CGCGGAGCAC CGCGAGGAGT TTTTTGCGCT GATTTCACAC
GCCCGGTCGC TGGGCATGCG CAAGGTCGCC TTTCTTCGGT CCGACTCCGA AACCGGCGAG
CAGCACCTTG CCAATGTCAG GCTGATTTGC CAGCGGCTGG GCATGACCCT GGTGGCCGAC
CTGCCGTTCA AGTCCGACAT CACCGACGCC CAGCTTGGAG CCATGGTCAC GCAACTGGAG
CAGGCCGGTG CGCAAATGGT GTTTAACCAC GGCGGCGTGG GCATCTACGA GAAACTCATT
CGCAAGGCCA GGGACAAGGC GATGCAGACC GCCTTCTACG CGGTGAATTC CGCTTCGGCG
CAACTGGTCA AGCGTCTGGG CGAGCTTTCG CACGGCATGG TTTTCACGCA GGTGGTGCCC
AGCCCCTGGG AGCGCAAATC CGCGATCACG CGCGAATACC AGACCGAGTT TGCGCGATTC
ATGCCGGGCC AGGAGTTTTC CTACGGCAGC CTTGAGGGAT ACGTGACGGC CAAGGCACTC
GTTGCCGCGC TGCGGCTGGC CGGCACCAGC CCCTCGCGCG AAGGCTTTGT GACGGCGCTC
GAAGGCGCTA CGCTCGACCT CAACGGCCTG CGCGCCAGCT ATGACAGCAG CAATCATCAG
GGGCTGGCGT TTGTCGATAT TTCCATGGTC ACGCGCGAGT CGAAATTCCG CCACTGA
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| Protein sequence | MKKLLAGLIA SATLFAGASV QAVDGVTARQ LLIGQSITLE GGKNDYGTAV LAGMQTYLSA
VNARGGVNGR QVVLKTLDDD NKSAKAETNA RQLVEKDKVF ALFGSIEGGP SVAVMKAANE
LKVPFFGPMA GSPTLRRPYQ PLVFPVRAEH REEFFALISH ARSLGMRKVA FLRSDSETGE
QHLANVRLIC QRLGMTLVAD LPFKSDITDA QLGAMVTQLE QAGAQMVFNH GGVGIYEKLI
RKARDKAMQT AFYAVNSASA QLVKRLGELS HGMVFTQVVP SPWERKSAIT REYQTEFARF
MPGQEFSYGS LEGYVTAKAL VAALRLAGTS PSREGFVTAL EGATLDLNGL RASYDSSNHQ
GLAFVDISMV TRESKFRH
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