| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0280 |
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| Symbol | |
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| ID | 4687274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 280508 |
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| End bp | 281287 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833273 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_980525 |
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| Protein GI | 121603196 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.898477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAGCA CCGTAGGAAT CCCCTGCTTG AAGGCAGGGG AGGATGTCAA GACCACGATT
GCGCATCATT TACGTCTTGT CCACGACCGG ATCAACGTCG CCTGCCTTGC CGCTGGGCGT
GACCCCTGCG GCGTGCGGCT GCTGGCGGTT TCGAAAACCT TTGGCGCCGA TGCGGTGGCC
GATGCGGTGG CCGCCGGACA GCAGGCCTTT GGCGAGAACT ACATTGCCGA GGGCGTCGAA
AAAATCCTGG CGCTGCGCCG CTGGCAAGCA GAAGAAGCGG CGCGCAGCGG CGTGGCGGCA
GCGGCGCTGG AGTGGCACTG CATCGGACCG ATCCAGAGCA ACAAGACGCG GCCGGTGGCC
GAACACTTCG ACTGGGTGCA GTCGGTGGAC CGGCTGAAAA TCGCCCAGCG CCTGAGCGAG
CAGCGCCCGC CCGGGCTGGC GCCGCTGCAA ATCTGCCTGC AGGTCAACAT TGATGGCGGC
GCGAACAAGT CAGGACTGGC ACCCGAAGAT GTCCTGGCGC TGGCCGAAGA GGTCGCCCGG
CTGCCGCGAC TGGTGCTTCG GGGCTTGATG GCGATTCCCG AGCCTGCTAT TGATTTTGTA
GCTGCTTGCG CAATACACGC AAGCGCAAAG GCCATTTTTG ACCACATAAA TGCAGCTGGC
GTGCTGGCCG TGCCGATGGA CACGCTGTCG CTCGGCATGA CGGCCGACCT GGAAGCCGCC
ATCCACGCCG GCAGCACCAT GGTGCGGGTG GGGACGGCGA TTTTTGGCGG GCGCGGCTGA
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| Protein sequence | MRSTVGIPCL KAGEDVKTTI AHHLRLVHDR INVACLAAGR DPCGVRLLAV SKTFGADAVA
DAVAAGQQAF GENYIAEGVE KILALRRWQA EEAARSGVAA AALEWHCIGP IQSNKTRPVA
EHFDWVQSVD RLKIAQRLSE QRPPGLAPLQ ICLQVNIDGG ANKSGLAPED VLALAEEVAR
LPRLVLRGLM AIPEPAIDFV AACAIHASAK AIFDHINAAG VLAVPMDTLS LGMTADLEAA
IHAGSTMVRV GTAIFGGRG
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