| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0278 |
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| Symbol | |
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| ID | 4687337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 278104 |
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| End bp | 279147 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639833271 |
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| Product | twitching motility protein |
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| Protein accession | YP_980523 |
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| Protein GI | 121603194 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA CGCAACTGCT GGCCTTTAGC GTCAAAAACA AGGCATCTGA CTTGCATCTG
TCGGCCGGCT TGCCGCCCAT GATCCGGGTT CACGGCGACG TGCGGCGCAT CAACATTGAT
CCGCTGGACC ACAAGGAAGT GCATGCCATG GTGTACGACA TCATGAACGA CACCCAGCGC
AAGCACTACG AAGAGTTCCT TGAGGTCGAT TTTTCCTTCG AAATTGATGG CCTGGCGCGC
TTTCGCGTCA ACGCCTTCAA CCACAACCGG GGCGCCGGCG CGGTGCTGCG GACCATTCCG
TCCAAGATCC TGACGCTGGA GCAGCTCGGC TGCCCGAAGA TTTTCGGCGA CCTGGCCTTG
AAGCCGCGCG GCATGGTGCT GGTCACCGGC CCGACCGGCT CGGGCAAATC GACCACGCTG
GCGGCGATGG TCAACTACCT GAATGAAACC GAGTACGGCC ACATCCTGAC GGTCGAAGAC
CCGATCGAGT TTGTCCATGA GTCCAAGAAA TGCCTGATCA ACCAGCGCGA GGTCGGCCCG
CACACGCTGA GCTTCAGCGC GGCGCTCAAG TCGGCCCTGC GCGAAGATCC GGATGCCATC
CTGGTCGGCG AAATGCGCGA CCTGGAAACC ATTCGCCTGG CGATGACGGC GGCTGAAACC
GGCCACCTGG TGTTCGGCAC GCTGCACACG TCGAGCGCCG CCAAGACCAT CGACCGGATC
ATCGACGTGT TTCCGGCCGA GGAAAAGGAA ATGATCCGCT CCATGCTGTC CGAATCGCTG
CAGGCGGTGA TTTCGCAAAC CCTGTGCAAG ACCAAGGACG GCCAGGGCCG GGTGGCGGCG
CATGAAATCA TGCTGGGCAC CAGCGCCATC CGCAACCTGA TCCGTGAAGC CAAGGTGGCG
CAGATGTACT CGTCGATCCA GACCGGCAAC AGCGTGGGCA TGCAAACACT CGACCAGAAC
CTGACCGACC TGGTCAAGCG CAACGTGATT TCTTCCGCGG AAGCACGCGG CAAAGCCAAG
ATTCCCGACA ATTTCCCGGG CTGA
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| Protein sequence | MDITQLLAFS VKNKASDLHL SAGLPPMIRV HGDVRRINID PLDHKEVHAM VYDIMNDTQR
KHYEEFLEVD FSFEIDGLAR FRVNAFNHNR GAGAVLRTIP SKILTLEQLG CPKIFGDLAL
KPRGMVLVTG PTGSGKSTTL AAMVNYLNET EYGHILTVED PIEFVHESKK CLINQREVGP
HTLSFSAALK SALREDPDAI LVGEMRDLET IRLAMTAAET GHLVFGTLHT SSAAKTIDRI
IDVFPAEEKE MIRSMLSESL QAVISQTLCK TKDGQGRVAA HEIMLGTSAI RNLIREAKVA
QMYSSIQTGN SVGMQTLDQN LTDLVKRNVI SSAEARGKAK IPDNFPG
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