| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0277 |
|---|
| Symbol | |
|---|
| ID | 4688662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 277439 |
|---|
| End bp | 278071 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639833270 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_980522 |
|---|
| Protein GI | 121603193 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCC TACTCGGACT GATCCGGCAA ACCACGCCAG CCATTGCGGG CAGCGGCCAT
CCTGACACGT TTTTCTTCTC CACCGCTTTT ACCGAGCAAG GCATTGACGC CACGTCGCTG
GTTCCGTGGG AAGCCCGGGC CAATGAGGTG GGCGCCAGGC GCCTGCCCGC CGAGCGCGGC
AGCAAGCTGC TGCAGGCGCT GTGGAGCAAG GACAACTACA TGGCGCGGCT GGGTTCGGAC
GCCGTGCCGC GCCTGGAAAA GTTTTTTGAC TTTGCCACCC TGCCGGCCAA TCGGGACGTG
ATTCGCCAGG ACGAGTACGG CAATTTCATG ATCGTGCTGC TGACCGGCAG CATTGCTGTG
GACCGCGAGC AGCCCTGGGG CGACCGGCTG CACCTGACAG AAGCGCGGCC CGGCGATATT
CTGGGTGAAA TGTCGCTGCT GGACAGCGGC GTGCGTTTTT CAGTCTGCAC GTCGCTTGCC
GAATGCGAAA TTGCCGTGCT GGGCGCGCAG GCGCTCGACG AGATGATGAC CACCGACCCG
GCGCTGGCGG CCAGCCTGAT TGCCTTGCTG GCGCGCAAGC TGTCGCGCCG CCTGCGGGTG
GTGAGCGCCC GGCTTGGTGA CCACAACAGC TGA
|
|---|
| Protein sequence | MKGLLGLIRQ TTPAIAGSGH PDTFFFSTAF TEQGIDATSL VPWEARANEV GARRLPAERG
SKLLQALWSK DNYMARLGSD AVPRLEKFFD FATLPANRDV IRQDEYGNFM IVLLTGSIAV
DREQPWGDRL HLTEARPGDI LGEMSLLDSG VRFSVCTSLA ECEIAVLGAQ ALDEMMTTDP
ALAASLIALL ARKLSRRLRV VSARLGDHNS
|
|---|
| |