Gene Pnap_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0274 
Symbol 
ID4689631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp274213 
End bp275115 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content64% 
IMG OID639833268 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_980520 
Protein GI121603191 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCTA TTTCCACGAA AAGCTACGAG CCGCCCCATC CCCGCAAGGT CGCCTTTCTC 
GGCCTTGGCG TCATGGGCTA CCCCATGGCT GGCCACCTGG CGCTGGCGGG CCACCAGGTC
ACGGTGTACA ACCGCAGCGC CGCCAAGGCC CAGGCCTGGA GCGACGAATT CAAGGGCGCT
TCAGCCGCCA CGCCGCGCGA AGCCGCCGCC GGTGCAGACA TCGTGTTTTG CTGCGTCGGC
AACGACGAGG ACCTGCGTTC GGTCACGCTG GGCGCCAACG GTGCGTTTGC AGGCATGAAG
CCGGGCGCCA TCTTTGTCGA TCACACCACC GCCTCGGCGT CTGTCGCCCG CGAACTCTAC
AGCGCCGCAA AAAATATCGG CCTGCAATTC ATCGATGCGC CCGTGTCCGG CGGCCAGGCA
GGCGCGCAAA ACGGTGCGCT CACGGTCATG TGCGGAGGCG AGGCGGCGGC GTTCGAGGTG
GTCAAACCTG TTGGCATGGC CTTTTCCAAA GCATTTACCC TGATGGGCGA GGCCGGTGCC
GGCCAGTTGA CCAAGATGGT CAACCAGATC TGCATCGCCG GACTGGTGCA GGGTTTGAGC
GAAGCCGTGG CCTTTGGCCA GAAGGCCGGG CTGGACATGA AGCAGGTGCT CGACGTGATC
GGCAAGGGCG CGGCGCAAAG CTGGCAGCTC GACAACCGGG GAAAAACCAT GGTCGCCGAC
CAGTTTGATT TCGGCTTTGC GGTGGACTGG ATGCGCAAGG ACTTGGGACT GGTCCTTGAC
GAGGCCAAGC GCAATGGCGC CCGCCTGCCG GTCACGGCGC TGGTGGACCA GTTCTATGCC
GACGTGCAGG CCATGGGCGG GCAGCGCTGG GACACCTCCA GCCTGATCAA GCGCCTGAAA
TAA
 
Protein sequence
MSPISTKSYE PPHPRKVAFL GLGVMGYPMA GHLALAGHQV TVYNRSAAKA QAWSDEFKGA 
SAATPREAAA GADIVFCCVG NDEDLRSVTL GANGAFAGMK PGAIFVDHTT ASASVARELY
SAAKNIGLQF IDAPVSGGQA GAQNGALTVM CGGEAAAFEV VKPVGMAFSK AFTLMGEAGA
GQLTKMVNQI CIAGLVQGLS EAVAFGQKAG LDMKQVLDVI GKGAAQSWQL DNRGKTMVAD
QFDFGFAVDW MRKDLGLVLD EAKRNGARLP VTALVDQFYA DVQAMGGQRW DTSSLIKRLK