Gene Pnap_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0271 
Symbol 
ID4688867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp272329 
End bp272790 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content64% 
IMG OID639833265 
Producthypothetical protein 
Protein accessionYP_980517 
Protein GI121603188 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTTTT CCAGAAAACA GGCGGTTAAT GTTGCGCCCA AGAGCACTGC AGGCGGTGCC 
GCAGCGTTGC CGAAGCAGGT TACCACCAAG TCGCGCGGGG ACGCGGCCGA GTCTGCCGCG
CGGGCCTATC TGGTCGGCGC CGGCCTGCGA TGGATCGAGT CCAATTATCG GACACCGGGG
CGCGGCGGCG GCGAGATTGA CCTCGTCATG CGCGTACCCG ATGGCACGCT GGTGTTTGTC
GAGGTCCGCC AGCGCAGCAG CGCTTCGCAT GGCGGCGCCG GCGCCAGCAT CAGCGCCGTC
AAGCAGCGGC GCATCATTTT TGCGGCGCGG CATTATTTGA TGCGCTTTGC CAGCCTGCCG
CCTTGCCGTT TCGATGTGGT GCTAGTCCAT GGCGCGCTTT CCGGGGGTGA AAGTCCACAG
GCCACTATCG AATGGCTGCC TGCGGCATTT GACGCCTCTT GA
 
Protein sequence
MWFSRKQAVN VAPKSTAGGA AALPKQVTTK SRGDAAESAA RAYLVGAGLR WIESNYRTPG 
RGGGEIDLVM RVPDGTLVFV EVRQRSSASH GGAGASISAV KQRRIIFAAR HYLMRFASLP
PCRFDVVLVH GALSGGESPQ ATIEWLPAAF DAS