| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0261 |
|---|
| Symbol | |
|---|
| ID | 4686127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 262290 |
|---|
| End bp | 263309 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639833254 |
|---|
| Product | hydrolase of the alpha/beta-hydrolase fold-like protein |
|---|
| Protein accession | YP_980507 |
|---|
| Protein GI | 121603178 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGA ATTACGGCGC CCCCTGGTGG TTACCCGATG GCAATACGCA GACCATCTGG
GCCGCCCTGC GCGCGCGCCG CTTCATGGGG CCGCCGCCCG TGTTTCGCCG CGAACGCTGG
AGTACGCCGG ATGACGACTT TGTCGATGTG GACTGGCTGA TGCCACGGTT TGAAAGCGCA
GGCCTGGCCG AGCGCGGGGC AGTTCGTGAA GCGCCAAGCG TGGGGGTGCC TCTGCTGGTG
CTGTTTCACG GACTTGAAGG CTCGTCGTCC AGCCACTATG CCCAGGCCTT TGCCGACGTC
GCCGGCAGCC GGGGCTGGGC CTGCGCCGTG CCGCACTTTC GCGGCTGTTC CGGCGAGCCC
AACCTGGCGC CGCGTGCCTA CCACTCGGGC GATTTTGCTG AAATCGACTG GATGCTCAGG
CGTTTTGCCG GCCTGAACCA GGGGCCGGTC GTGGCCGTCG GAATCTCCCT GGGTGGCAAT
GCGCTGATGC GCTGGGCCGG CGAGATGGGC ACGCAGGCCG GGCAGGTGGT GACGGCGGTG
GCGGCGGTCT GCGCGCCGCT TGATCTGACG GCCAGCGGCC AGGCCATCGG CCAGGGCTTC
AACCGTCAGG TGTACACCCG CATGTTCCTC AAATCCATGG TGCCCAAGGC GCTGCAAAAA
CTGGCGCAGC ATCCCGGCCT GTTCGACCGC GACACCTTGC TGGCGGCACG CGACCTGCAT
GCGTTCGACA ATGTCTTTAC CGGGCCGGTG CACGGGTTCA AGGGCGTTGA CGATTACTGG
TCGCGCGCGT CGGCCAAACC TCATCTGGGC CGGATTGCCG TGCCTGCGCT CGCACTGAAC
GCCTTGAACG ATCCCTTCAT TCCCGCAGCA AGCCTGCCGC AGTCTGCCGA TGTCAGCCCC
TGGGTCACCT TGTGGCAGCC GGCGCAGGGC GGCCATGTCG GCTTTCCCGC ATCGAATTTT
CCGGCGCATG TGCGCGCCAT GCCTGAAGCG GTGGCGGGCT TTCTGGCGGC GCAGCTTTAG
|
|---|
| Protein sequence | MAMNYGAPWW LPDGNTQTIW AALRARRFMG PPPVFRRERW STPDDDFVDV DWLMPRFESA
GLAERGAVRE APSVGVPLLV LFHGLEGSSS SHYAQAFADV AGSRGWACAV PHFRGCSGEP
NLAPRAYHSG DFAEIDWMLR RFAGLNQGPV VAVGISLGGN ALMRWAGEMG TQAGQVVTAV
AAVCAPLDLT ASGQAIGQGF NRQVYTRMFL KSMVPKALQK LAQHPGLFDR DTLLAARDLH
AFDNVFTGPV HGFKGVDDYW SRASAKPHLG RIAVPALALN ALNDPFIPAA SLPQSADVSP
WVTLWQPAQG GHVGFPASNF PAHVRAMPEA VAGFLAAQL
|
|---|
| |