| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0259 |
|---|
| Symbol | |
|---|
| ID | 4686864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 261125 |
|---|
| End bp | 261724 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639833252 |
|---|
| Product | LemA family protein |
|---|
| Protein accession | YP_980505 |
|---|
| Protein GI | 121603176 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1704] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.954507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCGA GCTTATTACG CTTATCTTTC ATCGCCCTGC TGGGTCTACT CCTTTCGGGC
TGCGGCTACA ACCAGTTCCA GAGCCTGGAC GAGCAGACCA AATCGGCTTG GTCCGAGGTG
CTGAACCAGT ACCAGCGCCG CGCCGACCTG GTGCCCAATA TCGTGGCCAC GGTCAAGGGC
GAAGCCGCTT TCGAGCAGGA CACGCTGACG AAGGTGATTG AAGCGCGCGC CAAGGCCACC
TCGATCCAGG TCACGCCCGA AACCCTGAAC GACCCGGCGG CCTTCAGCAA ATTCCAGGCC
GCGCAGGGCG AACTGGGCAG CGCCCTGAGC CGCCTGATGG TGGTCAGCGA ACGCTACCCG
GACCTGAAGG CGAACCAGGC TTTCCGCGAT TTGCGGGTGC AACTCGAAGG CACCGAAAAC
CGCATCACCG TGGCGCGCAA CCGCTACATC CAGACGGTGC AGGAGTACAA CGTGCTGGCG
CGCAGCTTTC CAAACAACCT GACCGCAATG ATTTTTGGCT ACAAGGTCAA GCCCAACTTC
GCGGTCGCCA ACGAAGCGCA GATTTCCGTG CCGCCGGTGG TTGATTTCAA CAAGAAATAA
|
|---|
| Protein sequence | MASSLLRLSF IALLGLLLSG CGYNQFQSLD EQTKSAWSEV LNQYQRRADL VPNIVATVKG
EAAFEQDTLT KVIEARAKAT SIQVTPETLN DPAAFSKFQA AQGELGSALS RLMVVSERYP
DLKANQAFRD LRVQLEGTEN RITVARNRYI QTVQEYNVLA RSFPNNLTAM IFGYKVKPNF
AVANEAQISV PPVVDFNKK
|
|---|
| |