| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0228 |
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| Symbol | |
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| ID | 4687991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 234667 |
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| End bp | 235974 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639833221 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_980474 |
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| Protein GI | 121603145 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.6533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.282981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC CCCTTGAACT CACCGCAGGT GTGAGAGCCC AGCGTGCGTG CATGGCGTTT
CTAGCGTTCG GGCTGGCCTG TTCGCTGCCA GCTGCGGCCC AGACGCTGGA CGTCTGGGTT
CACGCCGGGC TGGGTCCAGA GCGCGATGCC TACACGGCAT CGATCAAGGC GTTCAACGAG
GCCGGGCGCA ATCTCGGCGG CAAGGCGCAG GCTGTCCTGG TTCCAGTGCC TGAAGTGGGC
TACAACGAGG CGGTGGCGAA GGCTGCGGCT GACGGGCGGC TGCCTTGCGT GCTTGAGTTC
GATGGCCCCA ATGTCGCGGC CTACGCCGCG GCGGGGCACC TGCTGCCGCT GGAAAAAGTG
CAGTCGCTGG CCAGGATTCG CAATTCGATG CTTGCGTCGC TGGTGCGTCA GGGAACGGTC
AATGGGCGGC TGTACAGCGT GGCTCAATAC GACTCAGGTA TGGCGCTATG GGGAAATCGG
AACATGCTGA ATGCCGCCGG TGTGCGAATT CCAGCCAGAG CGGGCGACGG CTGGACGTTG
ACAGAGTTTG AAGACGTTCT CAAGCGGCTG AAGAACGCTG GCGTGCCTTC GCCGCTGGAC
ATGAAGTTCA ACTATGGCGT CGGAGAATGG TTCACTTATG GGTTTGCCCC GATTGTTCAG
GGTTTCGGCG GCGACCTGAT CGAGCGCGGC AGCATGCGCA GTGCCCAGGG TGTGCTCAAC
GGCCCGGGCG CCGTCAAGGC CATGAGCGCC TTGCAGAGCT GGATCAAGGC CGGTTACGTG
GATGTCATGC CAAAGGATGA TCGCGCATTC ATCGAAGGTC GCTCGGCCCT GTCTTGGGTG
GGGCATTGGG TCTACAAGGA CTACAAGCAA GCGCTTGGAG ACAACCTAGT GCTGATGCCC
CTGCCTCGCT TCGGTGTGCG GCCCGTGGTT GGCTCCGGGT CGTGGAACTT CGGCATCGCG
GCGTCGTGCA AGGAGCCCCA GCTCGCCATT CGCTTTATTG AACACCTGAT GAGTAGCGCT
GAGGTACTGC GCGTCACGGA CGTAAACGGC GCGGTACCCG GCACTGGCGT CGCGATGGCA
TTTAGCCGGC ACTATGGGCC CACCGGAGAG CTGCGCCTGT ACGCCGACCA GCTAATGTCG
GGCCAGGCTC AGGTGCGTCC GGCTTCACCG GATTACCCTG CCATCACTGC CGAGTTTTCA
AATGCCGTGA ATCGCATCGC TCGCGGTGCA GACCCTCAGC AGACACTCAA CCAGGCGGTG
ATCAACATAG ATCGAAAAAT AGAGAAAGCG CGTGCCGCGC GCCCTTGA
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| Protein sequence | MKNPLELTAG VRAQRACMAF LAFGLACSLP AAAQTLDVWV HAGLGPERDA YTASIKAFNE
AGRNLGGKAQ AVLVPVPEVG YNEAVAKAAA DGRLPCVLEF DGPNVAAYAA AGHLLPLEKV
QSLARIRNSM LASLVRQGTV NGRLYSVAQY DSGMALWGNR NMLNAAGVRI PARAGDGWTL
TEFEDVLKRL KNAGVPSPLD MKFNYGVGEW FTYGFAPIVQ GFGGDLIERG SMRSAQGVLN
GPGAVKAMSA LQSWIKAGYV DVMPKDDRAF IEGRSALSWV GHWVYKDYKQ ALGDNLVLMP
LPRFGVRPVV GSGSWNFGIA ASCKEPQLAI RFIEHLMSSA EVLRVTDVNG AVPGTGVAMA
FSRHYGPTGE LRLYADQLMS GQAQVRPASP DYPAITAEFS NAVNRIARGA DPQQTLNQAV
INIDRKIEKA RAARP
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