| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0224 |
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| Symbol | |
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| ID | 4687285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 229582 |
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| End bp | 230601 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639833217 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_980470 |
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| Protein GI | 121603141 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.770893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.229032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCA AACAGCTTTC CGCTAGCTTG GGCCTTTCTC CGACTACGGT AAGTCGGGCC
TTGAATGGAT ATCCCGAGGT TAGTGAGCGC ACCCGGGAGC GCGTCATCGA GGCCGCAAAG
GAAGTGGGAT ACGAGCCGAA CGTGACGGCG CGACGCCTTG CGCGAGGTGC CGTGGACGCC
ATCGGCATCG TTCACCCCAC CGGAGCCGGC CATCTGGATG ACCCCCGATT TCTGGAGGTG
GTGGATGGGC TGACTGAACG GTTTTCCAAA GCCGGCATCG ACTTGCTGAT CGCTTCAGCG
CGCCAGAAAG AAGAGGTTGC CACCTACAAG CGCTTGTTGC AGGGACGCCG TGTCGATGGG
TTCATCGTCC ACCACACGCG CCGTGTCGAT CCCCGGCTTG ACTACCTCCA GGAATGCGGT
GCGCCGTTCG TGGCCTATGG CCGCACAGAC ACGCCTGACT CGTATGCTTG GTTCGACTTC
GATAATGCCC TCGGTAGCTC TCTGGCGGTC CGGCGCTTAC AAGAATTTGG CCATCGGCGG
ATTGCCTACA TGCACGCGCC TCTGGAGCTG CACTTCGCCT ACCAACGCTA CCAGGGCTAC
CTGGATGCCA TGCATGCCGC GGGCTTGCCC GTGGATCCAG GTCTTGTCGT TCCGGCGGGG
TTCGGGCGTC GCGGTGGTTA CGAGGCGATG AAGACGCTGC TCGACCGCGC CGAAGGTCCG
ACCGCAGTGA TCGTTGACAA TAATTTGTGT GGTGTGGGTG TCCTGCGCTG CGCATTGGAC
GCGGGCCTGA AGATCGGGCG CCAGCTTTCC CTCATCGTTT ACGACGGCGT ACCGGTTGAT
TCCGTCGTAA CCTCGGTGCA GGTCACGTCG ATTGAGCAGC CCACGTCGTA TGCCGTGGGC
GTCCAGCTCG CAGAATTGAT GATTGGGGTT CTCGCCGGCC AGCCTGTGCA GGAATTGCAG
ACGCTGTGGT CTCCTCGAAT CGCCGCTGGC TCGTCGGACG GACCGATCAG CGAGCATTGA
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| Protein sequence | MDLKQLSASL GLSPTTVSRA LNGYPEVSER TRERVIEAAK EVGYEPNVTA RRLARGAVDA
IGIVHPTGAG HLDDPRFLEV VDGLTERFSK AGIDLLIASA RQKEEVATYK RLLQGRRVDG
FIVHHTRRVD PRLDYLQECG APFVAYGRTD TPDSYAWFDF DNALGSSLAV RRLQEFGHRR
IAYMHAPLEL HFAYQRYQGY LDAMHAAGLP VDPGLVVPAG FGRRGGYEAM KTLLDRAEGP
TAVIVDNNLC GVGVLRCALD AGLKIGRQLS LIVYDGVPVD SVVTSVQVTS IEQPTSYAVG
VQLAELMIGV LAGQPVQELQ TLWSPRIAAG SSDGPISEH
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