Gene Pnap_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0218 
Symbol 
ID4686121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp223079 
End bp223783 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content59% 
IMG OID639833211 
Producthypothetical protein 
Protein accessionYP_980464 
Protein GI121603135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.151097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTC GAAATTTTAA CCAGGCGGGT ATGAGCGCGC TGGGCTTGCT GATTCTCGCC 
ACCTGGCGCC ATGCCCATGC GCTGTCCCTG GGCGACCTGA CCAATGCCGA GGCCAGCAGC
GGCCTGAAAA CCGCGCTTGA AAAAGGCGCC CTGATGGCCG TTGCCCTGCT TGGCAAGCCC
GATGGATTCC TCGGCAACCC AAAAGTTCGC ATTCCGCTGC CCGGATACCT CGAAGATGCC
TCAAAACTGC TGAAAACCTT TGGCCAGGGC AGGCGTCTCG ACGAGTTGAC GACCTCGATC
AACCGCGCCG CCGAGGCCGC CGTGCCGATG GGCAAGGATT TGCTGGTCAG TGCCGTGCGC
GGCATGAATG TCAACGACGC CAAAAACATC CTGACGGGCG GCGATACCTC GGTGACGGCT
TTCTTTGCCG ACAAGACCCG CGTGCCGCTG GGCGTGAAGT TTTTGCCGGT AGTGAACCGG
GCCACTGAAA AGGTTGGCCT GGCGAATCAA TACAACGAAT TCGCCGGCAA GGCCGCCAGC
TTTGGCCTGG TCAGAAAGGA AGACGCCAAC ATCCAGCAGT ACGTCACCGG CAAAACGCTC
GATGGCCTTT ACCTGATGCT CGGTGAAGAA GAAAAGAAAA TCCGCCAGGA CCCGGTCGGC
ACCGGCAGCG CCATCTTGCA GAAGGTATTT GGCGCGCTGA AATAA
 
Protein sequence
MQRRNFNQAG MSALGLLILA TWRHAHALSL GDLTNAEASS GLKTALEKGA LMAVALLGKP 
DGFLGNPKVR IPLPGYLEDA SKLLKTFGQG RRLDELTTSI NRAAEAAVPM GKDLLVSAVR
GMNVNDAKNI LTGGDTSVTA FFADKTRVPL GVKFLPVVNR ATEKVGLANQ YNEFAGKAAS
FGLVRKEDAN IQQYVTGKTL DGLYLMLGEE EKKIRQDPVG TGSAILQKVF GALK