Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0218 |
Symbol | |
ID | 4686121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 223079 |
End bp | 223783 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639833211 |
Product | hypothetical protein |
Protein accession | YP_980464 |
Protein GI | 121603135 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.151097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGTC GAAATTTTAA CCAGGCGGGT ATGAGCGCGC TGGGCTTGCT GATTCTCGCC ACCTGGCGCC ATGCCCATGC GCTGTCCCTG GGCGACCTGA CCAATGCCGA GGCCAGCAGC GGCCTGAAAA CCGCGCTTGA AAAAGGCGCC CTGATGGCCG TTGCCCTGCT TGGCAAGCCC GATGGATTCC TCGGCAACCC AAAAGTTCGC ATTCCGCTGC CCGGATACCT CGAAGATGCC TCAAAACTGC TGAAAACCTT TGGCCAGGGC AGGCGTCTCG ACGAGTTGAC GACCTCGATC AACCGCGCCG CCGAGGCCGC CGTGCCGATG GGCAAGGATT TGCTGGTCAG TGCCGTGCGC GGCATGAATG TCAACGACGC CAAAAACATC CTGACGGGCG GCGATACCTC GGTGACGGCT TTCTTTGCCG ACAAGACCCG CGTGCCGCTG GGCGTGAAGT TTTTGCCGGT AGTGAACCGG GCCACTGAAA AGGTTGGCCT GGCGAATCAA TACAACGAAT TCGCCGGCAA GGCCGCCAGC TTTGGCCTGG TCAGAAAGGA AGACGCCAAC ATCCAGCAGT ACGTCACCGG CAAAACGCTC GATGGCCTTT ACCTGATGCT CGGTGAAGAA GAAAAGAAAA TCCGCCAGGA CCCGGTCGGC ACCGGCAGCG CCATCTTGCA GAAGGTATTT GGCGCGCTGA AATAA
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Protein sequence | MQRRNFNQAG MSALGLLILA TWRHAHALSL GDLTNAEASS GLKTALEKGA LMAVALLGKP DGFLGNPKVR IPLPGYLEDA SKLLKTFGQG RRLDELTTSI NRAAEAAVPM GKDLLVSAVR GMNVNDAKNI LTGGDTSVTA FFADKTRVPL GVKFLPVVNR ATEKVGLANQ YNEFAGKAAS FGLVRKEDAN IQQYVTGKTL DGLYLMLGEE EKKIRQDPVG TGSAILQKVF GALK
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