Gene Pnap_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0217 
Symbol 
ID4686079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp222550 
End bp223065 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content63% 
IMG OID639833210 
Productredoxin domain-containing protein 
Protein accessionYP_980463 
Protein GI121603134 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.219465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAA TTTCTCCCGT GGCAGTATGC CGCATGGTGC TGGCGGGCGC GCTGGCGCTC 
GGGGGTGCGG CGTTCCTGGC GGGCTGCAGC GGCGCGCAGG CCGCGCCCGA ATCGACCTTC
GTGCTGCTCG ACGGCAGCAA GCAGACCACG GCCGACCTGA AGGGCAAGGT CACGCTGGTC
AATTTCTGGG CCACCAGTTG CGTGACCTGC GTCGCCGAAA TGCCCAAGAT CATCGCCACC
CACAACAAGT ACAAAACCCG GGGCTATGAC ACGCTGGCCG TCGCCATGAG CTACGACCCG
CCAAGCTACG TCGTCAATTA CGCCGAAACC CGCCAGCTGC CGTTCAAGGT CGCCATCGAC
AACACCGGCG CCAATGCCAA GGCCTGGGGC GATGTGCAAC TCACGCCGAC GACCTTCCTG
GTCAACAAGC GCGGCCAGAT CGTCAAGCAG TTCGTCGGCG AGCCCGATTT TGCGGCGCTG
CACCAGCTGA TTGAAAAGCT GCTCGCCGAA ACCTGA
 
Protein sequence
MIKISPVAVC RMVLAGALAL GGAAFLAGCS GAQAAPESTF VLLDGSKQTT ADLKGKVTLV 
NFWATSCVTC VAEMPKIIAT HNKYKTRGYD TLAVAMSYDP PSYVVNYAET RQLPFKVAID
NTGANAKAWG DVQLTPTTFL VNKRGQIVKQ FVGEPDFAAL HQLIEKLLAE T