Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0217 |
Symbol | |
ID | 4686079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 222550 |
End bp | 223065 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639833210 |
Product | redoxin domain-containing protein |
Protein accession | YP_980463 |
Protein GI | 121603134 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.219465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAA TTTCTCCCGT GGCAGTATGC CGCATGGTGC TGGCGGGCGC GCTGGCGCTC GGGGGTGCGG CGTTCCTGGC GGGCTGCAGC GGCGCGCAGG CCGCGCCCGA ATCGACCTTC GTGCTGCTCG ACGGCAGCAA GCAGACCACG GCCGACCTGA AGGGCAAGGT CACGCTGGTC AATTTCTGGG CCACCAGTTG CGTGACCTGC GTCGCCGAAA TGCCCAAGAT CATCGCCACC CACAACAAGT ACAAAACCCG GGGCTATGAC ACGCTGGCCG TCGCCATGAG CTACGACCCG CCAAGCTACG TCGTCAATTA CGCCGAAACC CGCCAGCTGC CGTTCAAGGT CGCCATCGAC AACACCGGCG CCAATGCCAA GGCCTGGGGC GATGTGCAAC TCACGCCGAC GACCTTCCTG GTCAACAAGC GCGGCCAGAT CGTCAAGCAG TTCGTCGGCG AGCCCGATTT TGCGGCGCTG CACCAGCTGA TTGAAAAGCT GCTCGCCGAA ACCTGA
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Protein sequence | MIKISPVAVC RMVLAGALAL GGAAFLAGCS GAQAAPESTF VLLDGSKQTT ADLKGKVTLV NFWATSCVTC VAEMPKIIAT HNKYKTRGYD TLAVAMSYDP PSYVVNYAET RQLPFKVAID NTGANAKAWG DVQLTPTTFL VNKRGQIVKQ FVGEPDFAAL HQLIEKLLAE T
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