Gene Pnap_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0216 
Symbol 
ID4686348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp221967 
End bp222422 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content64% 
IMG OID639833209 
Productcytochrome c, class II 
Protein accessionYP_980462 
Protein GI121603133 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.322979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTT TTGTCTGTAT TGCTGCCGCG GCCAGCCTGT TTGCCTGGGC TGCCCCGGCC 
TCGGCGCAGT TTGCCAAGCC TGAAGACGCC GTCAAATACC GCCAGAGCGC GCTGTCGGTC
ATGGGCACGC ATTTCGGCCG CCTGGGCGCC ATGGTCAACG GCAAGGTGCC GTTCGATGCC
AAGGTGGCTG CCGACAGTGC CGAACTGGTC GCCACGATGG CCAAATTGCC ATGGGCCGGT
TTCGGTCCCG GCACCGACAA GGACAGCCGC AGCAAGGCGA TGTCGGAAGT CTGGACCGAG
CAGGCCAAGT TCAAGGCCGG AAGCGACAAG CTGGCGGCTG AATCAGTCAA GCTGGCTGCT
GCGGGCAAGA CCGGCAACCT CGACGCGCTG AAGACGGCTT TCGGCGCGAC GGCGGAAACC
TGCAAAGCCT GCCACGACGC TTTCCGCAAC AAGTGA
 
Protein sequence
MKAFVCIAAA ASLFAWAAPA SAQFAKPEDA VKYRQSALSV MGTHFGRLGA MVNGKVPFDA 
KVAADSAELV ATMAKLPWAG FGPGTDKDSR SKAMSEVWTE QAKFKAGSDK LAAESVKLAA
AGKTGNLDAL KTAFGATAET CKACHDAFRN K