| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0209 |
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| Symbol | rpsC |
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| ID | 4686917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 217962 |
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| End bp | 218849 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639833202 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_980455 |
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| Protein GI | 121603126 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.370528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAAA AAATCAACCC AACCGGTTTC CGGCTGTCAA TCAGCCGCAA CTGGTCCAGC
CGCTGGTACG CCAACAACCG TGACTTCGCC GGCATGCTGG CCGAAGACAT CAAGGTGCGC
GAGTACCTGA AGAAGAAGCT CAAGAATGCC GCGGTTTCGC GCGTTCTGAT CGAGCGTCCC
GCCAAGAATG CCCGCATCAC GATTTTCTCG GCTCGTCCGG GCGTCGTGAT CGGCAAAAAA
GGCGAGGACA TCGAAGCCCT CAAGAAGGAA CTGAGCCGCC AGTTGGGCGT GCCGGTTGCC
GTGAACATCG AAGAAGTTCG CAAGCCTGAA ATTGATGCCA AGCTGATCGC CGACAGCATC
ACCCAGCAGC TTGAAAAACG CATCATGTTC CGCCGTGCCA TGAAGCGCGC CATGCAAAAC
GCCATGCGTC TGGGTGCCCT GGGCATCAAG ATCATGTCGT CTGGCCGCTT GAACGGCATT
GAAATCGCTC GTTGCGAGTG GTATCGCGAA GGTCGCGTGC CCCTTCACAC GCTGCGCGCC
GACATCGACT ACGGCACCTC GGAAGCCCAA ACCACCTACG GCATCATCGG TGTCAAGGTC
TGGGTCTATA AGGGTGACAC GCTGGGCCGC AATGACGGCA CGGGCGCCAA GATGATCGAA
GTGGCCGACG AAGAGCGCAA GCCGCGCGGC CCGCGCCGTG ACGCACGTCC AGGTGACCGT
CCGGACCGTG GCGCGCCTCG CGGCGCCCCG CGCGCCCCGC GCGGCAACTA TGCTCCGGCT
GACGGCAGCG ACAAGCCAGC TGAAGCCGCT GGCGCCGACA ACAACACCGT TAAGCGCGTC
CGCAAAGCCG CGCCAGCTGC AGCAGCTGAC GGTGCCAAGA CCGAGTAA
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| Protein sequence | MGQKINPTGF RLSISRNWSS RWYANNRDFA GMLAEDIKVR EYLKKKLKNA AVSRVLIERP
AKNARITIFS ARPGVVIGKK GEDIEALKKE LSRQLGVPVA VNIEEVRKPE IDAKLIADSI
TQQLEKRIMF RRAMKRAMQN AMRLGALGIK IMSSGRLNGI EIARCEWYRE GRVPLHTLRA
DIDYGTSEAQ TTYGIIGVKV WVYKGDTLGR NDGTGAKMIE VADEERKPRG PRRDARPGDR
PDRGAPRGAP RAPRGNYAPA DGSDKPAEAA GADNNTVKRV RKAAPAAAAD GAKTE
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