| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0208 |
|---|
| Symbol | rplV |
|---|
| ID | 4687545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 217620 |
|---|
| End bp | 217949 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639833201 |
|---|
| Product | 50S ribosomal protein L22 |
|---|
| Protein accession | YP_980454 |
|---|
| Protein GI | 121603125 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0091] Ribosomal protein L22 |
|---|
| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.813634 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACAC GTGCAACCCT CCGGGGCGTT CGTCTGTCGG TCGACAAGGG CCGTCTGGTC
GCTGACCTGA TCCGCGGCAA GAAAGTGGAT CAAGCGCTCA ACATCCTGAA TTTCACGCAG
AAAAAAGCTG CTGGAATCAT CAAGAAGGTT GTGGAGTCCG CCATCGCCAA CGCTGAACAC
AACGACGGTG CCGATATCGA CGAGTTGAGG GTGAAAACCA TCTATGTCGA GCAAGGCGCC
ACGCTCAAGC GTTTCTCCGC GCGCGCCAAA GGCCGCGGCA ACAGCATCAG CAAGCCTACG
TGCCATGTGT ACGTGGTCGT TGGCAACTAA
|
|---|
| Protein sequence | METRATLRGV RLSVDKGRLV ADLIRGKKVD QALNILNFTQ KKAAGIIKKV VESAIANAEH
NDGADIDELR VKTIYVEQGA TLKRFSARAK GRGNSISKPT CHVYVVVGN
|
|---|
| |