| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0203 |
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| Symbol | rplC |
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| ID | 4689572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 214874 |
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| End bp | 215554 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639833196 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_980449 |
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| Protein GI | 121603120 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.459073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCTGA GCAACTCCCT CGGGTTGCTG GGCCGCAAGG TGGGCATGAT GCGTCTGTTC
ACTGATGATG GGGACACAGT TCCTGTCACA GTGGTGGATG TGTCAAACAA CCGCGTGACC
CAGGTTAAAA CCGAAGCAAA TGACGGCTAC GATGCCCTCC AAGTGGCATT TGGCTCGCGC
AAAGCATCGC GCGTGACCAA GCCTGAAGCC GGCCACCTTG CGAAAGCAGG CGTTGAAGCT
GGTGAAATCC TGAAAGAATT CCGCGTGACG GCTGACGTTG CAGGTAAATA TGCCGCTGGT
ACCGTTGTGC CCGCTGCTGA TATCTTTGCT GTCGGCCAGT TGGTGGATGT GCAGGGTACT
TCCATTGGTA AAGGCTTTGC CGGCACCATC AAGCGTCACA AGATGAGCTC GCAGCGCGCG
TCGCACGGTA ACAGCCGTTC GCACAACGTT CCCGGCTCCA TCGGCATGGC GCAGGATCCT
GGTCGCGTGT TTCCTGGTAA ACGCATGACG GGCCATCTGG GTGATGTCAC CAAGACCACG
CAAAACCTCG ACATCGTGCG CATTGACGAA GCCCGTCAAC TGCTGATGAT CCGTGGCGCC
GTGCCTGGTT CCAAAGGCGG TTTTGTGACG GTTCGCGCCG CCATCAAGGC CAAACCAACC
GCTGCCAAAG GAGCGAACTG A
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| Protein sequence | MSLSNSLGLL GRKVGMMRLF TDDGDTVPVT VVDVSNNRVT QVKTEANDGY DALQVAFGSR
KASRVTKPEA GHLAKAGVEA GEILKEFRVT ADVAGKYAAG TVVPAADIFA VGQLVDVQGT
SIGKGFAGTI KRHKMSSQRA SHGNSRSHNV PGSIGMAQDP GRVFPGKRMT GHLGDVTKTT
QNLDIVRIDE ARQLLMIRGA VPGSKGGFVT VRAAIKAKPT AAKGAN
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