Gene Pnap_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0199 
Symbol 
ID4686102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp210173 
End bp210646 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content55% 
IMG OID639833192 
Product30S ribosomal protein S7 
Protein accessionYP_980445 
Protein GI121603116 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000133398 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGTC GTCGCGAAGT CCCTAAACGT GAAATTCTTC CTGATCCAAA ATTTGGCGAT 
GTCGATCTTG CCAAATTCAT GAACGTGATC ATGCAAGGCG GCAAGAAAGC CGTCGCAGAG
CGCATCATTT ACGGCGCTCT GGAGCAAATC GAGAAAAAGA ACCCCGGCAA AGACCCGCTG
GAGGCTTTTC ACATGGCCAT CGGCAACATC AAGCCCATGG TTGAAGTGAA GTCCCGCCGC
GTCGGTGGTG CAAACTACCA GGTGCCGGTT GAAGTGCGTC CTGTCCGCCG CATGGCGCTG
GCCATGCGCT GGTTGAAGGA AGCTGCCAAG AAGCGTGGCG AAAAATCGAT GTCATTGCGT
CTGGCCAATG AATTGATGGA AGCCACCGAA GGCCGTGGCG GCGCCATGAA AAAGCGTGAC
GAAGTTCACC GCATGGCCGA AGCCAACAAG GCGTTCAGCC ACTTCCGCTT CTAA
 
Protein sequence
MPRRREVPKR EILPDPKFGD VDLAKFMNVI MQGGKKAVAE RIIYGALEQI EKKNPGKDPL 
EAFHMAIGNI KPMVEVKSRR VGGANYQVPV EVRPVRRMAL AMRWLKEAAK KRGEKSMSLR
LANELMEATE GRGGAMKKRD EVHRMAEANK AFSHFRF