| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0191 |
|---|
| Symbol | |
|---|
| ID | 4688943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 202703 |
|---|
| End bp | 203818 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639833184 |
|---|
| Product | Mg2+ transporter protein, CorA family protein |
|---|
| Protein accession | YP_980437 |
|---|
| Protein GI | 121603108 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0598] Mg2+ and Co2+ transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.503449 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.774114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCT TCACCATCAA CTCCGGCAGC CAGGGCGTCA TCGAAACCGA TGCCCTGCCG
GCCGAATTGC CGCCGCACGG CTTCATCTGG ATTGCCTGCG CCCGGCGCGA GTTCGAGGTG
ATGCTGGCGC CCATCCAGGC GGCGCTGCAG CGCCTGTGCG GCACCCAGCT GGTGGACCTG
CATGTCTCCG ACCTGCTGAA CAACCAGCTG CCCTCGCATT ACGACTACAC CTCGCAGTAC
GACATGCTGG TGTTTCGCCG GCTGGCGGCG GGCCAGACCG AAACCGACCT GTCCCAGCCC
GGCGAGCCGC TGCACCAGCC CGCCAGGCGC AGCGGGCCGC CGGTGCTCAA GCGCATCGAC
ACCAGCCCGG TCGGCTTTGC GGTGTTTGAC CGGGTGCTGC TGACGGTGCA TCCGGCCGGC
TGCAGCGTGC GCGAAGCCTA CGCGCTCAAG CTGCTCAACG CCACCTCGCC CGAAGCGCGC
GCCAACGGCG TCAAGCTGCC GGCCAGCCCG GCCGACCTGA TGCTGCGCAT CGTCAACCAG
ATGGTCGATG GCTACCTGGC GCTGCGCCGC GAACTCACGC GCCAGATGGA CCACTGGCAG
TACGAGCTGC TCAATCCCAA TGCGCGCTTC AACAACTGGA GTGCGGTGCT CGACGCCCGG
CTGGCGCTGC ACCTGCTCGA CGAGATCTGC GAAGACCAGC GCGCCGCGCT GCAGGACTGG
CTCGACTCGA TAGAAACCTG GCCCGACGCT GGCACGCCGG GCGCGCAGCG CGAGCGCGAA
CTGCTCAAGG TGCGCTCGCG CGATGTGCTG GAGCATATCG AGCGCGTCGT CCACCATGTG
CGGCGCATGG AGCAAAGCGC CGAGACCGCC GTGCAGATGC ATTTTTCGGC GCAGAGCCAC
CGCACCAACG ACATCATGCG CACCCTGACG GCGCTGACGG CGGTGTTTTT GCCGCTGAAC
CTGGTCACCG GATTTTTCGG CATGAACTTC GAGTTTTTGC CGGCCATCCA CAGCTCGGCC
GGGTTCTGGT GGACCTTCAG TTTGATGCTG CTGCTGGTGA TCGTCGTGGT GTCGGTGTTC
TGGCGCAAAC AGTACCTGGC CAGGACCAGC CGCTAA
|
|---|
| Protein sequence | MRVFTINSGS QGVIETDALP AELPPHGFIW IACARREFEV MLAPIQAALQ RLCGTQLVDL
HVSDLLNNQL PSHYDYTSQY DMLVFRRLAA GQTETDLSQP GEPLHQPARR SGPPVLKRID
TSPVGFAVFD RVLLTVHPAG CSVREAYALK LLNATSPEAR ANGVKLPASP ADLMLRIVNQ
MVDGYLALRR ELTRQMDHWQ YELLNPNARF NNWSAVLDAR LALHLLDEIC EDQRAALQDW
LDSIETWPDA GTPGAQRERE LLKVRSRDVL EHIERVVHHV RRMEQSAETA VQMHFSAQSH
RTNDIMRTLT ALTAVFLPLN LVTGFFGMNF EFLPAIHSSA GFWWTFSLML LLVIVVVSVF
WRKQYLARTS R
|
|---|
| |