Gene Pnap_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0190 
Symbol 
ID4686492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp201912 
End bp202682 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID639833183 
Producthypothetical protein 
Protein accessionYP_980436 
Protein GI121603107 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.665614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.961864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCA GCCTCTTTCC CGATCAAACC CTTTCTCCGG GTTCCCGCAT CAAGGTGGGC 
TGCGCGGGCT GGAGCCTGCC GCGCGCGCTG TGGCCCGGGT TTCCTGCCGC CGGCACGCAT
CTGCAGCGTT ATGCCGCGCG CCTGAACGCG GTTGAAATCA ACTCGTCGTT TTACCGACCG
CACCAAGAGG CGACCTATGC GCGCTGGGCG GCCAGCGTGC CGGACGACTT CCGCTTTTCG
GTCAAGCTGC CCAAGACCAT CACGCACCAG CGGCGCCTCG CCGATTGCAC CGGGCTGCTC
GACACCTTTT TGGGCCAGGT CGGCGGCCTT GGCGGGCGCC TGGGCTGCCT GCTGGTGCAG
CTGCCGCCCA GCCTGGCCTT TGACGCCGCC ACGGTGACCA GCTTCTTGCG CGCCCTGCGC
GAGCGCCACG GCGGCCCGGT GGCGCTGGAG CCGCGCCATG CCAGCTGGTT CAGCGCGCCG
GCCGACGCCC TGCTCGATGC CTGGCAGGTC GGCCGGGTGC TGGCCGACCC GGTGGTGCAT
GAGGCTGGCC GCATTCCGGG CTGTTTTGCG GGCCTGGTCT ATGTGCGCCT GCATGGCTCG
CCGCGCATGT ATTACTCGGC GTATGACCGC GCCGTGCTCG ATGCGCTGAT CATTCGGCTT
GAACTGGCGG CCAGGTCTGG CGCCAATGTC TGGTGCCTGT TCGACAATAC CGCCGAAGGT
GCGGCAGTTG CCGATGCCCT GTACACCCTG CAAGGCCTGG CGGTCCGCTG A
 
Protein sequence
MQASLFPDQT LSPGSRIKVG CAGWSLPRAL WPGFPAAGTH LQRYAARLNA VEINSSFYRP 
HQEATYARWA ASVPDDFRFS VKLPKTITHQ RRLADCTGLL DTFLGQVGGL GGRLGCLLVQ
LPPSLAFDAA TVTSFLRALR ERHGGPVALE PRHASWFSAP ADALLDAWQV GRVLADPVVH
EAGRIPGCFA GLVYVRLHGS PRMYYSAYDR AVLDALIIRL ELAARSGANV WCLFDNTAEG
AAVADALYTL QGLAVR