Gene Pnap_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0189 
Symbol 
ID4686914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp201305 
End bp201871 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content59% 
IMG OID639833182 
Producthypothetical protein 
Protein accessionYP_980435 
Protein GI121603106 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0838572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTT TGTCCCGCAT CCATGCCGGC CCTGGCGCGA CCCAGGCCAG CGCCGATGAC 
CTGACACGGG ACAACGTGGA GTCGATGCGC CGGGTCGAGG AACAGGCCAT GGCCAAACGC
AGCCGCGCCG ACCGCATCGC CGCTTTCGTG GCCAGCTTTT GCGGCTCCAT GCCCTTTGTC
TGGCTGCATG TGCTGCTGTT TTTCGTCTGG CTGGCGCTGA ACTCGTGGCC GGGCATCCAT
CATTTCGACC CCTACCCGTT CACTTTTCTG ACACTGGTTG TTTCGCTGGA GGCGATTTTC
CTGTCGGCCT TCATTTTGAT CAGCCAGAAC TATGAACTGC GCATCAGCGA CCGGCGCAAC
CAGCTGGACC TGCAGATCAA CCTGCTGACC GAGCAGGAAA ACACCAAGAT GCTCCAGTTG
CTGGAGCAAA TTGCCGCGAA AGTGGGGGTT GACGTGAGCG GTGATGCCGA GCTGCGCTTT
CTCAAGCAGG TCACCCACCC CGAAAAGCTG ATTGCCCAGA TCGAACACGC CCAGCAGGAA
CGCCCGCTGA AGACGTCTTC GGTTTAA
 
Protein sequence
MSILSRIHAG PGATQASADD LTRDNVESMR RVEEQAMAKR SRADRIAAFV ASFCGSMPFV 
WLHVLLFFVW LALNSWPGIH HFDPYPFTFL TLVVSLEAIF LSAFILISQN YELRISDRRN
QLDLQINLLT EQENTKMLQL LEQIAAKVGV DVSGDAELRF LKQVTHPEKL IAQIEHAQQE
RPLKTSSV