Gene Pnap_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0187 
Symbol 
ID4686961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp199954 
End bp200559 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content66% 
IMG OID639833180 
ProductDSBA oxidoreductase 
Protein accessionYP_980433 
Protein GI121603104 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.115932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCACCA CCGTGGACTA TTACTTCACC CCGCAAAGCC CCTGGACCTA CCTGGGCCAC 
GCGCGTTTTG CGCAGATAGC GCGCGCGGCG GGCGCTGCGG TTCGCGTGCT GCCGATAGAC
CTGGGCGGCA AGGTCTTTCC GATTTCGGGC GGGCTGCCGC TGGGCCAGCG CGCCCCGCAG
CGCCAGGCCT ACCGGCTGCT CGAACTGCGC CGCCATGCGG ACTTCCTGGG GCTGCCGCTG
CATGTCAAAC CGAAGTTTTT CCCGGTCTCG GGCGATGACG CCTCGCGCCT CATCATCGCG
GTCGATCTGC ACGATGGCGT TGAGGCCGCC ATGAAGATCA GCGGCGCGAT CTTTACCGCG
CTGTGGGCGC AGGAACGGCA CATTGCGAGC GAAAAGGTGC TGGCCGAACT GCTCAATGAG
TGCGGACTGG ACGCGGCGCG GCTGGAGCAG TCCTACAGCC AGGCGGTGCA GGAGCGCTAC
GAGGACAATA CCGCGCAAGC CATTCAAGCC GGCATCTTCG GCGCGCCCAG CTACCTGATC
GAGGGCGAGC TGTTCTGGGG CCAGGACCGG CTTGATTTTG TCGAGCGCAG GCTCAAGCCG
GCCTGA
 
Protein sequence
MSTTVDYYFT PQSPWTYLGH ARFAQIARAA GAAVRVLPID LGGKVFPISG GLPLGQRAPQ 
RQAYRLLELR RHADFLGLPL HVKPKFFPVS GDDASRLIIA VDLHDGVEAA MKISGAIFTA
LWAQERHIAS EKVLAELLNE CGLDAARLEQ SYSQAVQERY EDNTAQAIQA GIFGAPSYLI
EGELFWGQDR LDFVERRLKP A