Gene Pnap_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0176 
Symbol 
ID4689733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp187285 
End bp189336 
Gene Length2052 bp 
Protein Length683 aa 
Translation table11 
GC content65% 
IMG OID639833169 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_980422 
Protein GI121603093 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC TCAGAAATGT TGAAGCCGAC CTGTCACGCT TTCGCACCCG TGTGCTGGTG 
GCCGGCCTGG TGGTGTTTCT CTGCTTTTCG CTGGTGGCGT CGCGGCTGGT GTATTTGCAG
GTCTATCGCC ACGAAGACCT GCGCGCGCAG GCCGAGAGCA ACCGCACGGC GATTGTCCCC
ATCGTTCCCA ATCGCGGCCT GATCCTGGAC CGCAACGGCA TCGTGCTGGC GTCCAACTAC
TCGGCCTACA CGCTGGAAAT CACCCCGTCC AAGGTCGAGA ACCTGGACGA AACCATCGCC
GCGCTGGAAA AGCTGGTCGA TATCCAGCCC CGCGACAAGC GGCGCTTCAA GCGCCTGCGC
GAGGAGTCGA AAAGCTTCGA GTCGATCCCG TTGCGCACGC GCCTCTCCGA CGAGGAAGTG
GCGCGCTTCG CGGCCCGGCG CTTTGCCTTT CCGGGCGTGG ACATCAAGGC CCGGCTGTTT
CGCAGCTATC CCTACGGCGA GCTGGGCAGC CATGTGGTGG GCTACATCGG CCGCATCAAC
CAGCTAGAGA AAGACGCCAT CGAGGAGCGC GAGGAAGAAG GCAATTACCG GGGCACCGAC
TACATCGGCA AGCTCGGCGT CGAGCAGAGC TTCGAGCAGC AGCTGCACGG CCAGACCGGC
GTCGAGCAGA TGGAAACCTC GGCCGGCGGG CGCGCGCTGC GCAAGCTCGC CACCAGCCCG
GCCACGCCCG GCAACACCGT CATGCTGTCG CTGGACATCG GCCTGCAAAA ACTGGTCGAG
GACATGTTCG GCACGCGGCG CGGCGCGCTG GTGGCGCTGG ACCCGAGAAA CGGCGAGGTG
CTGGCCTTCG TCAGCAAGCC GACCTTCGAC CCGAACCTGT TCGTCGATGG CATCGACCAG
GAAAGCTGGC AGGCGCTCAA CGAGTCCATC GACAAGCCGT TGCTGAACCG GGCGCTGCGC
GGAACCTACC CGCCGGGCTC GACCTACAAG CCCTTCATGG CCCTGGCCGC GCTGCAGACC
GGCACGCGTT CGCCGGGCGC CATCATCCAC GACCCGGGCT TTTACATGTT TGGCGGCCAC
CGCTTCGGTA GCCCCGAGAA CGAGCGCGGC GGCGCCATGG ACATGAACCG CGCGATTGTC
GAGTCGAGCA ACGTGTATTT TTATTCGCTG GCCAATGAAC TCGGCGTCGA TGCGATTCAC
GACTTCATGG CGCCGCTGGG TTTTGGCCAG CTCACCGGCA TCGACATCAA CGGCGAAGTG
CGCGGCGTGC TGCCCAGCCA GGCCTGGAAA CGCGGCTATT TCAAGCGCGT CGAGCAGCAG
AAGTGGTTTG CCGGCGAAAC CATCTCGCTG GGCATCGGCC AGGGCTACAA CAGCTTCACC
ATGCTGCAGC TGGCGCAGGC AACGGCCACG CTGGCCAACA ACGGGCTCAG GCACAAGCCG
CGCCTGGTGA TGGGCACGCA GGACACGGTG ACGCGCGCCC TGCACCCGCT GCCCGCCGAC
CCGCCGGTCG ATCTGGGCTA CAAGCCCGAG AACGTGGCCA TCGTCCGCAA GGCGCTGGTC
GGGGTGACGC AGGGCGGCAC CTCGACCAAG GTGTTTGCCG GCGCGCAGTA CCTGTCCGGC
GGCAAGACCG GCACGGCCCA GGCGGTGACG ATAGGCCAGA AGGACAAGTA CAACAAGTCC
CGGATGGAAG AGCACCAGCG CGACCATGCG GTTTACATGG CGTTTGCGCC GGCCGACAAC
CCCAAAATCG CGCTGGCGGT GATTGTTGAA AACGCCGGCT GGGGCGCTGG CGTGGCCGCA
CCGATTGCCC GCAGGGTGTT CGACTATGTC CTGATGGGCC AGTACCCGAG CGAAGAAGAC
ATGCTCGCGG TGCAGGCCGG ACGGGCTGCC GCGCCGATTG GCAAGCCGCG CCTGGCCGCC
GAGATGAATG CGCTGCTGGT GGACGATACG CCCGGCGGTT CGCCATCTGC CGCGCCTCAA
AAAGCCGAGC CCCCAGCCGT GGCGGCAAGG ACAAGGCCCT TCAGCCGGCA AAACCGGCCA
AGGCCGCCGT AA
 
Protein sequence
MTELRNVEAD LSRFRTRVLV AGLVVFLCFS LVASRLVYLQ VYRHEDLRAQ AESNRTAIVP 
IVPNRGLILD RNGIVLASNY SAYTLEITPS KVENLDETIA ALEKLVDIQP RDKRRFKRLR
EESKSFESIP LRTRLSDEEV ARFAARRFAF PGVDIKARLF RSYPYGELGS HVVGYIGRIN
QLEKDAIEER EEEGNYRGTD YIGKLGVEQS FEQQLHGQTG VEQMETSAGG RALRKLATSP
ATPGNTVMLS LDIGLQKLVE DMFGTRRGAL VALDPRNGEV LAFVSKPTFD PNLFVDGIDQ
ESWQALNESI DKPLLNRALR GTYPPGSTYK PFMALAALQT GTRSPGAIIH DPGFYMFGGH
RFGSPENERG GAMDMNRAIV ESSNVYFYSL ANELGVDAIH DFMAPLGFGQ LTGIDINGEV
RGVLPSQAWK RGYFKRVEQQ KWFAGETISL GIGQGYNSFT MLQLAQATAT LANNGLRHKP
RLVMGTQDTV TRALHPLPAD PPVDLGYKPE NVAIVRKALV GVTQGGTSTK VFAGAQYLSG
GKTGTAQAVT IGQKDKYNKS RMEEHQRDHA VYMAFAPADN PKIALAVIVE NAGWGAGVAA
PIARRVFDYV LMGQYPSEED MLAVQAGRAA APIGKPRLAA EMNALLVDDT PGGSPSAAPQ
KAEPPAVAAR TRPFSRQNRP RPP