Gene Pnap_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0174 
Symbol 
ID4690117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp185644 
End bp186564 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content67% 
IMG OID639833167 
Productrod shape-determining protein MreC 
Protein accessionYP_980420 
Protein GI121603091 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTAG GAACTCTCGA CAGATCCCTG CCGCCCTTTT TCAACCAGGG GCCGTCGGTC 
TATTCCAAGC TGGTTTTCTT CGGCGCGCTG TCGCTGTTCC TGATGGTGGC CGATGCGCGC
TTCAACGTCA CCCAGCCGAT CCGCGCCGTG ATTGCGACCG CCCTGTACCC GGTGCAGTGG
CTGGCCGTGC AGCCGGTGCA TGCGGTGCAG GGTGCCAGCG AGTATTTCAC CAGCCTGAGC
CAGGCCCAGT CCGAGAGCGC GGAGGCCCGC AAAAAGCTCG CGCTGCAGTC GCTGCGCGCC
GGCCAGGTCG AGGAACTGAT GCAGGAAAAC AACCGCCTGC GCAAGCTGCT GGAGCTGAAA
GAGCAAATCA CCACGCCCGT CATGGCGGCC GAGGTGCTCT ACGATGCGGC CGATTCCTAC
ACCCGCAAGG TCATCATCGA CAAGGGGCAG GCGCACAAGG TCGATCTGGG TTCGCCGGTG
CTCGATGAGT CCGGCGTGCT CGGGCAGGTC ACGCGCGTGC ATCCGCTGGT CAGCGAAGTC
ACGCTGGTGG TGGACCGGGA GCTGGCCATT CCGGTGCTCA ATGTGCGCAC CGGCGCGCGC
AGCGTGGCCT ATGGCGACCC GACCGTGGGC GGCAGCGGGA TGGAACTGCG CTTCATGGGC
AGCAATGCCG ACGTGCAGCA GGGCGACCTG CTGACCACCA GCGGCGTCGA TGGCGTCTAT
CCGCCCGGCC TGCCGGTGGC CCGGGTCAGC CGGATCGAGC ACCGCGCCGA ATCGGCCTTT
TCCAAGATCT ACTGCGTGCC CGAGGCGCTG ACCGCCGGCG CGCGCCATGT CATCGTGGTC
AAGCCGGTCA CCTCCGACGT GGCGCTGCGC CCGCCAGTCG CCGCGCCGGT CGTGCCTGCC
AAAAGGGGAA GCGCCAAATG A
 
Protein sequence
MALGTLDRSL PPFFNQGPSV YSKLVFFGAL SLFLMVADAR FNVTQPIRAV IATALYPVQW 
LAVQPVHAVQ GASEYFTSLS QAQSESAEAR KKLALQSLRA GQVEELMQEN NRLRKLLELK
EQITTPVMAA EVLYDAADSY TRKVIIDKGQ AHKVDLGSPV LDESGVLGQV TRVHPLVSEV
TLVVDRELAI PVLNVRTGAR SVAYGDPTVG GSGMELRFMG SNADVQQGDL LTTSGVDGVY
PPGLPVARVS RIEHRAESAF SKIYCVPEAL TAGARHVIVV KPVTSDVALR PPVAAPVVPA
KRGSAK