| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0168 |
|---|
| Symbol | pyrE |
|---|
| ID | 4688685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 179453 |
|---|
| End bp | 180166 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639833161 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_980414 |
|---|
| Protein GI | 121603085 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCGG AGGGCAGCCT GGCCCAGGAA TTCGTGCAGT TCGCGGTTGA ATCGGGGGTG
CTGCGCTTTG GCCAGTTCAA GACCAAGGCC GGCCGCATGA GCCCCTACTT TTTCAATGCC
GGCCTGTTCG ACGACGGCGC CAAGCTGGGC CGGCTGGCGC AATTTTATGC GCGCCAGTTG
CTGGCCGAGG AGCAGCGCAG CGGCCTGGCG TTCGACATGA TTTTCGGCCC GGCCTACAAG
GGCATTCCGC TGGCCGCCGC CGTGGCCATC GAGCTGGCGC GGCTGGGGCG CAACCTGCCG
TTTGCCTACA ACCGCAAGGA AGCCAAGGAC CACGGCGAGG GCGGCACGCT GGTCGGCGCG
AAGCTCCAGG GGCGGGTGCT GATCGTCGAT GACGTGATGT CCGCCGGCAC CGCCGTGCGC
GAGTCGATTG CGCTGATCCA GGCCGCCGGC GCCACGCCGC ACGCCGTGGC CATTGCGCTG
GACCGGCAGG AAAAAGCGAC GGAGAACGGG CTGGACGTGG AACACAGCGC CGTGCAATAT
GTCACCCGGC AGCTCGGCCT GCAGGTCTGC GCCATTGCGC GGCTGAGCGA CTTGCTGCAG
TATCTGTCCG AGAAGAGCGA CAGTCCATCG GGCGGCGAAA CCCTTGATGG ACAGCGCTTG
AAAGACCATT ACCAGTCCGT TCTGGCCTAC CGCGAACGCT ACGGCGTCAA CTGA
|
|---|
| Protein sequence | MPAEGSLAQE FVQFAVESGV LRFGQFKTKA GRMSPYFFNA GLFDDGAKLG RLAQFYARQL
LAEEQRSGLA FDMIFGPAYK GIPLAAAVAI ELARLGRNLP FAYNRKEAKD HGEGGTLVGA
KLQGRVLIVD DVMSAGTAVR ESIALIQAAG ATPHAVAIAL DRQEKATENG LDVEHSAVQY
VTRQLGLQVC AIARLSDLLQ YLSEKSDSPS GGETLDGQRL KDHYQSVLAY RERYGVN
|
|---|
| |