| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0164 |
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| Symbol | |
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| ID | 4688181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 172430 |
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| End bp | 174193 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833157 |
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| Product | ABC transporter related |
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| Protein accession | YP_980410 |
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| Protein GI | 121603081 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTC TCTGGACCTA CCTGCGGCCG CACCGCGCGC TCGCCGCCCT CGCCCTGCTG
CTGGCGGCCA TCAGCCAGGT GCTGGCGCTG GTCGATCCGA TCATTTTCGG CAGGATCATC
GACGACTACG CCATCGGCCG CGCCGGAAAG TCCGAAGCCG AGCTGGTGTC GGGCGTGCTG
TCGCTGCTCG GGCTGGCGGT CGGGGTTGCC GTGCTGTCGC GGCTGGCCAA GACGCTGCAG
GACTACGCCA CGCGGCTGGT AGTGCAGAAG TTCGGCACGC AGATCTTCAA CGACGGGCTG
CGCCAGGTGC TGCGCCTGAA GTTCCAGGAA TTCGAGGATC TGCGCAGCGG CGAAACGCTG
TCGCTGCTGC AAAAGGTGCG CGCCGACAGC GAGCGCTTCA TCAACGCCTT CATCAACACC
CTGTTCGCGG CCATCGTGGG CATCGCTTTC CTGAGTTGGT ATTCGGTCAC CCGGCACTGG
CTGCTGGTGC CGGTGTTCCT GGTCGGCGTG CTGCTGATGG GCGGGCTGAC CGGGCTGCTG
AGCCGCGAGA TCAAGACCCA GCAGCGCTCC ATCGTGCGCG AGACCAACCG CAATTCGGGC
TTCATCACCG AGTCGCTGCG CAATATTGAA CTCATCAAGA GCCTGGGCCT GACCTTTCCC
GAGATTCGGC GCCTGCAGGC GCAGACGATG AAAATATTCG CGCTGGAGAT GAAGAAGGTC
AGGCGCATCC GGCTGCTGTC CTTCCTGCAG GGAAGCACGC TGAGCCTGCT CAAGCTGGCG
ATCTTGTTTG CCCTGCTGTG GCTGATTTTT CGCGATGTGC TGAGCACCGG CGAGCTGATC
GCGATGCAGT TCATTTCGGT GGCGATTTTT GCGCCGCTGC AGGAACTGGG CAATGTGATC
GTCGCCTACC GGGAAGTGGA AACGTCGCTG CTCAACTTTG ATGCGCTGAT GAACAAGCCG
GTCGAGCGGC GGCCCGAGTC GCCGGTCAAG ATCGGCCCGG TCACGGAGGT GCGTTTTACC
GATGTCAGCT TTCGCCACAA GGGGGCCAGC GACAACGCGC TGGAATCGCT GTCGTTTTCC
GCCGGTCTGG GCGACACCAT CGCTTTTGTC GGTCCGTCGG GCTCGGGCAA GTCAACCCTG
GTCAAGCTGC TGGTCGGCCT GTACACGCCG GCCAGCGGCC AGGTGTTCTA CAACGGCATT
GCAACCCGGG ACCTGCGCTA CAACGAGGTG CGGCGGCAAA TCGGCTTCGT GACGCAGGAA
ACCCACCTGT TCGCCGGCAC GCTGCGCGAG AACCTGCTGT TCGTCAAGCC CGACGCCAGC
GATAGGGAAA TCATCGCCGC GATGGAGCAG GCCGCGTGCG CCTACCTGCT GGAGCAGTCG
CCCGACGGGC TGGACACCGC CATCGGCGAG ATGGGCATGA AGCTCTCGGG CGGCGAAAAG
CAGCGCCTGT CGATTGCCCG GGCGCTGATC CGCCAGCCGC GCCTCCTGAT TTTTGACGAA
GCCACGTCGG CGCTCGATTC CATCACCGAA GAGCAGATCA CCCGCACGGT GCGCCACCTG
TCCATCAGCA GCACCCGGAT CACGCTCCTG ATTGCCCACC GGCTTTCAAC CATCATGCAT
GCCAGCACCA TCTTCGTGCT GGAAAAGGGC TGCATCGTGG AAAGTGGCAC CCATGCGGCG
CTGCTCGAAG CCAAGGGGCT GTACTACGCG ATGTGGCGCC AGCAGATCGG CGAACGGCCG
GCCAAGCGCG TGGCGCTGGA GTAA
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| Protein sequence | MRILWTYLRP HRALAALALL LAAISQVLAL VDPIIFGRII DDYAIGRAGK SEAELVSGVL
SLLGLAVGVA VLSRLAKTLQ DYATRLVVQK FGTQIFNDGL RQVLRLKFQE FEDLRSGETL
SLLQKVRADS ERFINAFINT LFAAIVGIAF LSWYSVTRHW LLVPVFLVGV LLMGGLTGLL
SREIKTQQRS IVRETNRNSG FITESLRNIE LIKSLGLTFP EIRRLQAQTM KIFALEMKKV
RRIRLLSFLQ GSTLSLLKLA ILFALLWLIF RDVLSTGELI AMQFISVAIF APLQELGNVI
VAYREVETSL LNFDALMNKP VERRPESPVK IGPVTEVRFT DVSFRHKGAS DNALESLSFS
AGLGDTIAFV GPSGSGKSTL VKLLVGLYTP ASGQVFYNGI ATRDLRYNEV RRQIGFVTQE
THLFAGTLRE NLLFVKPDAS DREIIAAMEQ AACAYLLEQS PDGLDTAIGE MGMKLSGGEK
QRLSIARALI RQPRLLIFDE ATSALDSITE EQITRTVRHL SISSTRITLL IAHRLSTIMH
ASTIFVLEKG CIVESGTHAA LLEAKGLYYA MWRQQIGERP AKRVALE
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