| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0163 |
|---|
| Symbol | |
|---|
| ID | 4688158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 171564 |
|---|
| End bp | 172418 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639833156 |
|---|
| Product | protein of unknown function RIO1 |
|---|
| Protein accession | YP_980409 |
|---|
| Protein GI | 121603080 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1718] Serine/threonine protein kinase involved in cell cycle control |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGCA TGAAAGCACC TCCAAGACTG CAATCCCTCG TTGAAGAGGG CCTGATCGAC
ACCGTGGTTC GCCAGCTGAT GAGCGGCAAG GAAGCGATGG TGTACGTCGT GCGCTGTGGC
GACGAAACCC GCTGCGCCAA GATCTACAAG GAAGCCGACC AGCGCAGCTT TCGCCAGGCG
GTCGATTACA CCGAAAACCG CAAGGTCAAG AACACCCGGC AGGCCCGGGC CATGGCCAAG
GGCACCAAAT TCGGCCGGCA GGCCAGCGAA GCCGCCTGGC AGAGCGCCGA GGTCGATGCG
CTCTACCGGC TGGCCGACGC CGGGGTGCGC GTGCCCCAGC CACACAATTT CTGCGACGGC
GTGCTGCTGA TGGAACTGGT GACCGACGCG CACGGCGACG CGGCCCCGCG CCTGAACGAC
GTCGATTTCA CGCCCGAGCA GGCGCGCCGG CACCATGCGA CGCTGATCAC CGAGGTAATC
CGCATGCTGT GCGCCGGCAT CGTGCACGGC GACCTGTCGG AGTTCAACAT CCTGCTGGCC
GAAGACGGCC CGGTCATCAT CGACCTGCCG CAGGCGGTGG ATGCTGCCGG CAACAACCAC
GCCAGCCGCA TGCTGCTGCG CGACGTGGCC AACCTGCGCA ACTTCTTCGG TCGTTTCGCG
CCCGACCTCT TGACCATCGA CTACGGCAAC GAGATGTGGG ACTTGTACCA GCGCGGCGTG
CTGTACCCCG AGACGGTGCT GACCGGCCAT TTCAGGCGCA AGACCGGCCC GGTCGATGTC
GGCGGCGTGC TGCGCGAGAT TGACGACGCC AGCGCCGAGG AGGCCGCGCG CCGCATGCGC
ATGGCGCAGT CGTAG
|
|---|
| Protein sequence | MAGMKAPPRL QSLVEEGLID TVVRQLMSGK EAMVYVVRCG DETRCAKIYK EADQRSFRQA
VDYTENRKVK NTRQARAMAK GTKFGRQASE AAWQSAEVDA LYRLADAGVR VPQPHNFCDG
VLLMELVTDA HGDAAPRLND VDFTPEQARR HHATLITEVI RMLCAGIVHG DLSEFNILLA
EDGPVIIDLP QAVDAAGNNH ASRMLLRDVA NLRNFFGRFA PDLLTIDYGN EMWDLYQRGV
LYPETVLTGH FRRKTGPVDV GGVLREIDDA SAEEAARRMR MAQS
|
|---|
| |