Gene Pnap_0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0150 
Symbol 
ID4686398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp160648 
End bp161892 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content69% 
IMG OID639833143 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_980396 
Protein GI121603067 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAGC AGATCTGGGC CCGGTTTACC TCGCACCTGT ATGTGCGGAT CTGGCTGGCT 
GTGGTGGCGA CCGTCATGGT GCTGACCTTC CTGGTGGGCG CCGCCTGGCG GCTGAGCGCC
GACCCGCCAC AGCTGCCCAT CCGCGAAGTG CTGGTGCACA ACGCCGCCGG CGAAGTCATC
GGCAAGGGGC AGACCAAGCC TGATCGCCAG CGCGGCGACG ACATCGAATT TGACGTGGTC
ACCACCGACG GCCAGACCCT GAACCTGCTG CTGCCCCGGC CGCAGCGCCC GCCGGGCAGC
CCCTGGAACC GGCCGCCGTT CGGCTTTGGC TGGATGCTGG GCCTGGTCGG CCTGGCCGTG
GCGCTGGGCG CCTACCCGGT CATGCGGCGC CTGACGCTTC GGCTTGAAGC CCTGCAGCGC
GGCGTGGAGC GCTGGGGCGC GGGCGACCTG TCGGCACGCA TCAATACCGA GGGGCGCGAC
GAGGTGGCTT TCCTGGCGCG GCGCTTCAAC CACGCCGCCG AGCGCATCGA GACGCTGATG
GAGTCGCACA AGTCGCTGCT GGCCAATGCC TCGCACGAGC TGCGCTCGCC GCTGGCGCGC
ATCCGCATGG GGCTCGAACT GATGGGCGTG GACAAGTCGT CACCGCAGCG CATGGAAATT
TCCCGCAGCA TCGGCGAGCT AGACCAGCTG ATCGACGAGA TCTTGCTGGC CAGCCGGCTC
GACACCAAGC AGGCCGATGC CGAGCCTTTC GAAACGCTGG ACCTGACCGG ACTGGCCGCC
GAGGAATGCG CGCGCGTCAA TGCCGAGCTG CAGGCCGAAC TGCAAACCGG GCCGGACGCG
GACCACAGCC TGACGCTGCA GGGCTCGCCC CGGCTGCTGC GCCGGCTGAT CCGCAACCTG
CTTGAAAACG CCCGGCGCTA CAGCCACGGC GACATCAGCC TTGAACTCGC CCAGAGCGGC
ACGGGCAGCG GGCAGCGGGC CATCGTCAAG GTGCATGACC GGGGGCCGGG CGTGCCGGCC
GGGCAGCGAG AGCGTATTTT CGAGCCCTTT TACCGGCTTC CCGGCGCCAG CGAGCGCGAA
GGCGGCGTGG GCCTGGGGCT GGCGCTGGTC AAGTCGATCA GCGAACGCCA TGGCGGCAGC
GTGCGTTGCG AGGAACGGCC TGGCGGCGGC GCGTCATTCA TTGTCGAACT GCCGATGGAC
CGGCCCGGCC CGGCGGCGGC CCGTGATACC GGAAGTTTCA ACTAA
 
Protein sequence
MSKQIWARFT SHLYVRIWLA VVATVMVLTF LVGAAWRLSA DPPQLPIREV LVHNAAGEVI 
GKGQTKPDRQ RGDDIEFDVV TTDGQTLNLL LPRPQRPPGS PWNRPPFGFG WMLGLVGLAV
ALGAYPVMRR LTLRLEALQR GVERWGAGDL SARINTEGRD EVAFLARRFN HAAERIETLM
ESHKSLLANA SHELRSPLAR IRMGLELMGV DKSSPQRMEI SRSIGELDQL IDEILLASRL
DTKQADAEPF ETLDLTGLAA EECARVNAEL QAELQTGPDA DHSLTLQGSP RLLRRLIRNL
LENARRYSHG DISLELAQSG TGSGQRAIVK VHDRGPGVPA GQRERIFEPF YRLPGASERE
GGVGLGLALV KSISERHGGS VRCEERPGGG ASFIVELPMD RPGPAAARDT GSFN