Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0150 |
Symbol | |
ID | 4686398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 160648 |
End bp | 161892 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639833143 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_980396 |
Protein GI | 121603067 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAAGC AGATCTGGGC CCGGTTTACC TCGCACCTGT ATGTGCGGAT CTGGCTGGCT GTGGTGGCGA CCGTCATGGT GCTGACCTTC CTGGTGGGCG CCGCCTGGCG GCTGAGCGCC GACCCGCCAC AGCTGCCCAT CCGCGAAGTG CTGGTGCACA ACGCCGCCGG CGAAGTCATC GGCAAGGGGC AGACCAAGCC TGATCGCCAG CGCGGCGACG ACATCGAATT TGACGTGGTC ACCACCGACG GCCAGACCCT GAACCTGCTG CTGCCCCGGC CGCAGCGCCC GCCGGGCAGC CCCTGGAACC GGCCGCCGTT CGGCTTTGGC TGGATGCTGG GCCTGGTCGG CCTGGCCGTG GCGCTGGGCG CCTACCCGGT CATGCGGCGC CTGACGCTTC GGCTTGAAGC CCTGCAGCGC GGCGTGGAGC GCTGGGGCGC GGGCGACCTG TCGGCACGCA TCAATACCGA GGGGCGCGAC GAGGTGGCTT TCCTGGCGCG GCGCTTCAAC CACGCCGCCG AGCGCATCGA GACGCTGATG GAGTCGCACA AGTCGCTGCT GGCCAATGCC TCGCACGAGC TGCGCTCGCC GCTGGCGCGC ATCCGCATGG GGCTCGAACT GATGGGCGTG GACAAGTCGT CACCGCAGCG CATGGAAATT TCCCGCAGCA TCGGCGAGCT AGACCAGCTG ATCGACGAGA TCTTGCTGGC CAGCCGGCTC GACACCAAGC AGGCCGATGC CGAGCCTTTC GAAACGCTGG ACCTGACCGG ACTGGCCGCC GAGGAATGCG CGCGCGTCAA TGCCGAGCTG CAGGCCGAAC TGCAAACCGG GCCGGACGCG GACCACAGCC TGACGCTGCA GGGCTCGCCC CGGCTGCTGC GCCGGCTGAT CCGCAACCTG CTTGAAAACG CCCGGCGCTA CAGCCACGGC GACATCAGCC TTGAACTCGC CCAGAGCGGC ACGGGCAGCG GGCAGCGGGC CATCGTCAAG GTGCATGACC GGGGGCCGGG CGTGCCGGCC GGGCAGCGAG AGCGTATTTT CGAGCCCTTT TACCGGCTTC CCGGCGCCAG CGAGCGCGAA GGCGGCGTGG GCCTGGGGCT GGCGCTGGTC AAGTCGATCA GCGAACGCCA TGGCGGCAGC GTGCGTTGCG AGGAACGGCC TGGCGGCGGC GCGTCATTCA TTGTCGAACT GCCGATGGAC CGGCCCGGCC CGGCGGCGGC CCGTGATACC GGAAGTTTCA ACTAA
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Protein sequence | MSKQIWARFT SHLYVRIWLA VVATVMVLTF LVGAAWRLSA DPPQLPIREV LVHNAAGEVI GKGQTKPDRQ RGDDIEFDVV TTDGQTLNLL LPRPQRPPGS PWNRPPFGFG WMLGLVGLAV ALGAYPVMRR LTLRLEALQR GVERWGAGDL SARINTEGRD EVAFLARRFN HAAERIETLM ESHKSLLANA SHELRSPLAR IRMGLELMGV DKSSPQRMEI SRSIGELDQL IDEILLASRL DTKQADAEPF ETLDLTGLAA EECARVNAEL QAELQTGPDA DHSLTLQGSP RLLRRLIRNL LENARRYSHG DISLELAQSG TGSGQRAIVK VHDRGPGVPA GQRERIFEPF YRLPGASERE GGVGLGLALV KSISERHGGS VRCEERPGGG ASFIVELPMD RPGPAAARDT GSFN
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