| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0147 |
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| Symbol | |
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| ID | 4686257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 158095 |
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| End bp | 159036 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639833140 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_980393 |
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| Protein GI | 121603064 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.65778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCAG CAGCCCCTTC CATGGAAAAT CGCGACGGCA AAATCTGGAT GGACGGCCAG
ATGGTCGAGT GGCGCGATGC CAAGATCCAT GTGCTGACCC ACACCCTGCA CTACGGCTGC
GGCGCTTTCG AGGGCGTTCG CGCCTACAAG ATGCCCGACG GCGGCACGGC GATTTTCCGG
CTGGAAGAGC ACACCGAACG GCTGTTCAAC AGCGCCAAGA TCCTGCGCAT GAAGATCCCG
TTCACGCCGC AAGAGGTGAT GGACGCGCAG CTCGCCGTGG TGCGCGAGAA CAAGCTGGAA
AGCGGCTACA TCCGCCCGCT GACCTGGATC GGCTCCGAAA AACTGGGCGT CAGCCCCAAG
GGCAACACCA TCCATTTGAT GGTCGCCGCC TGGACCTGGG GCGCCTACCT GGGCGAGGAA
GGCATGAAGC GCGGCATCCG CGTCAAGACC AGCAGCTTCA CGCGCCACCA CGTCAACATC
ACCATGATCC ACGCCAAGGC GGTGAGCAAC TACACCAACT CCATCCTGGC CAACATGGAA
GCCACCGACG AAGGCTACGA CGAGGCGCTG CTGCTCGACC CGCAGGGCTT TGCCTCCGAG
GGCGCGGGTG AGAACCTGTT CATCGTGCGC AAGGGCGTGG TCTATACGCC CGATTCGAGC
GCCGGCGCGC TCAACGGCAT CACGCGCAAC ACCGTCTTCA GCATCTGCAA AGACCTTGGC
ATCGAGATCA GGGAAAAGCC GATTACCCGT GACGAAATCT ATATTTCCGA CGAGGCTTTC
TTCTCTGGAA CGGCCGCTGA AGTCACGCCG ATCCGCGAGC TTGACCGCAT TGAAATCGGC
AGCGGTTCGC GCGGCCCGAT CACCGAGAAA ATCCAGGCGG CCTTCTTTGA CATCGTCAAC
GGCCGCAACC CCGAGTACGC CTCCTGGCTG ACCCGCGTCT AA
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| Protein sequence | MTPAAPSMEN RDGKIWMDGQ MVEWRDAKIH VLTHTLHYGC GAFEGVRAYK MPDGGTAIFR
LEEHTERLFN SAKILRMKIP FTPQEVMDAQ LAVVRENKLE SGYIRPLTWI GSEKLGVSPK
GNTIHLMVAA WTWGAYLGEE GMKRGIRVKT SSFTRHHVNI TMIHAKAVSN YTNSILANME
ATDEGYDEAL LLDPQGFASE GAGENLFIVR KGVVYTPDSS AGALNGITRN TVFSICKDLG
IEIREKPITR DEIYISDEAF FSGTAAEVTP IRELDRIEIG SGSRGPITEK IQAAFFDIVN
GRNPEYASWL TRV
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