| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0131 |
|---|
| Symbol | |
|---|
| ID | 4689202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 143732 |
|---|
| End bp | 144829 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639833124 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_980377 |
|---|
| Protein GI | 121603048 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0787] Alanine racemase |
|---|
| TIGRFAM ID | [TIGR00492] alanine racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGTC CCATTCTTGC CACCATCCAC CTTGCCGCCC TCAGCCACAA CCTGGCGCGC
GTGCGCACCG CCGCGCCTGA CGCCAAGGTC TGGGCCGTCG TCAAGGCCAA CGCCTACGGC
CACGGCATCG AGCGCGTTTT CGATGCGCTG CGTAGCGCCG ACGGCTTTGC GCTGCTCGAC
CTGGACGAGG CCAGGCGCCT GCGCGCGCTC GACTGGCGCG GCCCGATCCT GCTGCTCGAA
GGCTGCTTCG AGGCGCGCGA CCTGGAACTG TGCTCGCGCC TGGGCCTGTG GCACACGATT
CATTGCCAGG AGCAGATCGA CATGCTGGCC GCGCACAAGA CGCAGCTGCC GCACCGCGTG
TTCCTGAAGA TGAACACCGG CATGAACCGC CTGGGCTTCA CGCCCGAGCG CTTTCGCGCC
GCCTGGATTC GCCTCAATGC CCTGCCGCAG GTCGATGAAA TCTCGCTGAT GCAGCATTTT
CCCGATGCCG ACGGCCCCAA GGGCATCACC GCGCAGCTCC AGGCTTTCGA CGCCGTGACG
CATGATTTGC CCGGCGAGCG CACGCTCAGC AACAGCGCCG CCATCCTGCG CCACACCGGC
GCGCTGGCCG GGCGCTCGGA CTGGGTGCGG CCCGGCATCG TGCTCTACGG CAGCGCGCCC
GACTTTCCCG AGCACAGCGC CAGCGACTGG GAGTTGCAGC CGACGATGAC GCTGTCATCC
CGAATCATCG GCCTGCAGAC CCTGGCGGCT GGCGACACGG TGGGCTACGG CTCCAGCTTT
GTCGCCGAAG GGCCAATGCG CATCGGCGTC GTGGCCTGCG GCTACGCCGA CGGCTACCCG
CGCCACTGCC CCACCGGCAC GCCGGTGCTG GTGAACGGCG TGCGCACGCG CATGGTCGGG
CGCGTCAGCA TGGACATGAT CACCGTGGAC CTCACGCCCG TGCCCAGGGC CGGCATGGGC
AGCGAGGTCA CGCTCTGGGG CCGCGCGTCA AAAGGCGGCG CCATGCTGCC CATCGACGAG
GTGGCGCGGG CCGCCGGCAC GGTGGGCTAC GAGCTGATGT GCGCGGTGGC GCCGCGCGTG
CCGGTGGCGG TCGATTGA
|
|---|
| Protein sequence | MPRPILATIH LAALSHNLAR VRTAAPDAKV WAVVKANAYG HGIERVFDAL RSADGFALLD
LDEARRLRAL DWRGPILLLE GCFEARDLEL CSRLGLWHTI HCQEQIDMLA AHKTQLPHRV
FLKMNTGMNR LGFTPERFRA AWIRLNALPQ VDEISLMQHF PDADGPKGIT AQLQAFDAVT
HDLPGERTLS NSAAILRHTG ALAGRSDWVR PGIVLYGSAP DFPEHSASDW ELQPTMTLSS
RIIGLQTLAA GDTVGYGSSF VAEGPMRIGV VACGYADGYP RHCPTGTPVL VNGVRTRMVG
RVSMDMITVD LTPVPRAGMG SEVTLWGRAS KGGAMLPIDE VARAAGTVGY ELMCAVAPRV
PVAVD
|
|---|
| |