Gene Pnap_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0110 
Symbol 
ID4689766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp116771 
End bp117349 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID639833103 
ProductMOSC domain-containing protein 
Protein accessionYP_980356 
Protein GI121603027 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.721008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0279097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAC TTCTTTCGGT TCAGGTCGGC CTTGCCCGCC GGACAAACAT CGGCGAGCGC 
AGCATTCTGA CGGCCTACGG CAAGCAGCCG GTGGCGCAAG CCGTTCCGGT GCTGCCGCTG
GGCTTGCTGG GCGACGATCA GGCTGACCTG TCGGTTCACG GCGGGCTGGC AAAAGCCGTC
TATGCCTACC CTTCAGAGCA TTACGCGTAC TGGCAGGCCG CCCGGCGCGG AGCCGGCGTG
GGCGAGATCG ACGCCAGCCT GCCCCACGGC AGCCTGGGCG AAAACCTGAC GCTGCAAGGC
CTGCTGGAAA CCGAGGTCTG GGCCGGCGAT GTGCTGAAAT TTCCCGGCTG CGAACTGCGT
GTGACGCTGC CACGCGAGCC TTGCTACAAA TTCAACGCCG CCATGGGTTT TGGCCGCGCT
TCCAAACTGA TGGCGCAAAC CGGCTTTTGC GGGTTTTACC TGGCGGTGCA AACATCGGGA
ACGCTGCGCG CCGGCGAGTC ATTCGAGGTG ATTCCGGGCC GGCGCGGCGT CGGCATTCCT
GCGCTGTTCG CCGCCAAGAT GAGCAAGCAT CTGCGCTAG
 
Protein sequence
MPQLLSVQVG LARRTNIGER SILTAYGKQP VAQAVPVLPL GLLGDDQADL SVHGGLAKAV 
YAYPSEHYAY WQAARRGAGV GEIDASLPHG SLGENLTLQG LLETEVWAGD VLKFPGCELR
VTLPREPCYK FNAAMGFGRA SKLMAQTGFC GFYLAVQTSG TLRAGESFEV IPGRRGVGIP
ALFAAKMSKH LR