| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0097 |
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| Symbol | |
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| ID | 4687029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 101249 |
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| End bp | 104923 |
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| Gene Length | 3675 bp |
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| Protein Length | 1224 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833090 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_980343 |
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| Protein GI | 121603014 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.105547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCC GGCTGGGCCT TCGTTCCCGC CTGATGCTGC TGGTGCTGGC GGCCCTGGTG
CCGGTATTCA GCCTGTTTAG CTGCTCGGCT GCAAAAAACC AGCAAGCCGT GCTGGCGCTG
GCCAGGGCCA GCCTGCAGTC CCAGGCCTTG CTCGCGGCCG CGCACCAGCA GCGCCTGGTC
GAGCGGGTGG CCCAGTTGCT TGGCGACATC GCCAGCGGCC CCTCCATCAA GAACCCGCGA
AATCGCCTGT GCGTGCAGTT CCTCAAGAAT CTGCAGGCTC AGGATCCTGG CTATTCCAAT
CTGGGCGTCG CTGATCTGGA CGGCCGGCTT TCCTGTGACG CGGTTAACTC CGGCGCCCCG
GTCAATTTGG CCGACCGAAG CTTCTTCAGG CAGGTGCTTG GCGGGCAGGC GTTTTCGGTC
GGCGATTATG TGGTGGCGCG CTCAAGCGGC AGGCCCGGCA TGGCTTTCGG CGTGCCGGTG
TACAGCGGTG AAGGTGTCCT CAACGGCGTT GCGTTTGCCG GCATTGCCAT TCAGGAGTTT
GCCGCTGTCC TGGCCGCCGA GCCGGTCGTC GAAGGGGCGC GGTTGCGGGT GATCGACCGC
AACGGCATCG TCCTGGCGGC GCATCCGCCC GCTGCCGGCC TGGCCGGCAG CAGGGAGCCG
GACGCCGTGG TGCTGGGCGC CCTGCAGTCG TTGCAGCCGG AGGTGCGCGA GGCGGCGGAT
GCCGGCGGCA TTGAGCAGGT GTATGCCTTT GCCCCGGTCA GTGGCTCGCA GGGCGGACTG
TTCGTGGCCA TCAGCGTGCC GCGCGATGTC CTTACCGCCG CGCCGCGCGC CTTGCTGCTG
GCCGATCTTG CCGCGCTGCT GGGCGTGACG GCTTTTGGCA TGGCCTGCGC GTGGGCCATG
GGCAGGCGCC TGGTGGTCAA TCCGGCCAAT GCCATCCTGG AGGAAGCCAA CGAAATCGCG
CGTGGCAATC TTCATGCGCG CGTCAGGCTC GGCCGCTGGA ATCAGGATGA GATTGGCCGC
CTGGGACTGG CTTTCAATCG CATGGCGCAA TCTCTGCAAG CGCAATGCAG TGAGCGGGAC
GCGGCCCTGC GCCAGGCCGA CGCAGAGCGC GCCATGCGTG ACCTGATCCT CAACAGCATG
AGCGAAGGCG TGATTGCCGT CGATGCCGGC GGCCGGTTCA TGCTGTTCAA TGCTGCTGCG
CGCAAGATAT TTTGCGTGCC AGCGACCGAC ATGCTGTTTG ATGAATGGCG AAAAATCAAC
CCGCTGAGGA TGCTTGATGG ACAAATCATG GCGTCTGACG GGCCGCTGAA GCAGACCCTG
CGCGGCGTCA GCATCGACAA GCTGGACCTG GTGTTTTCCA GCCCTGACAG CCAGAACCGC
ATTTTGAGAA TGAGCACCCG GCCCTTGCTT GACCCGCAAG GCCAGCAGAT CGGCGCCCTG
GCGGTGTTCA TTGATGTCAC CCAAACCAAG GCGGCAGAAA GTTTTGCCCT GGCGCAGGAG
AATGTACTGG TGCTGATCGC GGGCGGCGCA GCGCTGGGCG AATCGCTTGA AGCGATTGTG
CTGCTGATTG AAAAGAGCGC GCCGCAAAGC CTGTGTTCCA TCCTGATGGC CGAAGGTGGA
CAACTGCGCC ACGGCATTGC GCCCAGCTTG CCGCCAGACT TTGTCCGGGC GATTGACGGC
TTGCCGATTG CCGAAGGGGT TGGGGCCTGT GGGACGGCGG CGTTTCGCAA GGAAAGCGTG
ATCATTGAAG ACGTTACGCA GGACGCGCGC ATGCACGGCT ACCAGGAACT GCTGGCCGCC
CACGGCTTGC GCGCCTGCTG GAGTACGCCG GTGGTGGCAG GCGATGGCGA GGTGCTGGCG
ACCTTCGCCA TTTATCGCCG CGCGCCCGGC GGGCCGCTTC CCGCCGACCT GGCCTTGATC
GCCACGGCCA CCCGGCTGGC ACGGCTGGCG CTGGAGCGCG CCCGGGTCAA GGCAGAACTC
ATCGGCAGTG AAGCGAACTT TCGGGAACTC GCGGAAAACA TCGAAGACGT TTTTTACAAC
CTGGATATTC ACCACGGCAG CCCGCGCCTG CGCTATGTCA GCCCACGCTA CGAGAAGGTC
TGGGGCCGCA GCTGCGAAAG CCTGTACGCC GCGCCCGTCT CCCGTGCCGA TGCCGTGCTG
CCCGAAGACC GGCACGTCAT GGTGCGGGCC GATGCGCGCA ATGCGGCCGG GCAGAACGCC
AATGTGGAGT ACCGCATTCT GTCAACCGAT GGCCGGACCC GCTGGATACG CGACCGCTCC
TATCCCATGT TCAATGATGC CGGCGAGGTG GTCCGGGTGG TGGGGACGGC GCGCGACATC
ACCGAAAGCA AGCTCGCCGA AATCGCATTG ATCAGCACCC ACCGGGCACT GCAGATGCTG
AGCCGCTCCA GCATTGCCAT CAACCGCATC CATGACGAAG CCGGCTTGCT GGCCGAGGTG
TGCCGCGTGG CGGTGGAGGT GGGCGGCTAC CGCATGGCCT GGGTGGGCTA TGCCAGCGAT
GACGAGGAAA AAAAGATCCA GCCGGTGGCC CATGCGGGCA GCGAATTGGG TTACCTCGAC
GTCATCACGC TTTACTGGCG CGATGACCTG CCCGGGGGGC AGGGGCCTGC TGGCCAGGCC
ATCCGCACGG GACGACCGCA GCAAGTCAGT GACATCAGCA AGCCGGGCAG CCAGTTCCAC
TGGACCGATG CTGCGGTGCA GCGCGGCTAT CACAGCGTCC TCATGCTGCC TTTATGCAGC
GAACAGCGCA GTTTTGGGGT GCTGTGCCTG TATGCCGGAC AGGTTCAGGA GTTTGCCCCC
GAAGAGGTCA ACCTTCTGCA GGAACTGGCC GACAACCTGG CGTTCGGCAT TGTCAGCCTG
CGTACACGGC TGGAGCGCAG TCAGGCGCGC GAGGAAATCC TGCAGCTCAA CGCCAGTCTT
GAAGAGCGGG TCGAGCAGCG CACCGCGCAG CTGAGGTTTG CCAACCAGCA ACTGGAGGCG
TTTTCCTATT CGGTCTCGCA TGACTTGCGC ACCCCGCTCA GCAGCATCGA CGGCTTCAGC
ACCTTGCTTG AAAAGTCGCT GACCCGCCCG GACAGCGCGC CACTGACCGA GCGCAGCCGG
CATTGCCTGG CGCGCATCCG TTCGGGCGCG CGGCAAATGG GCGACCTGAT CGACGCCATG
CTGGCGCTGG CGCAGGTGTC ACGCTCCAGC CTGGTCTGGG AGGCGGTTGA CCTCAGCGCC
AGTGCCGGGG CGCTGCTGTC CGGGCTGCAC GAGCGTGAGC CGGGCCGGAT CGCCCGGCTG
CAGGTCGAGC CCGGCATGAG GGTGCAGGGA GACCCGCGCC TGCTCAGGCA GGTGCTCGAC
AACCTGCTGG GCAATGCCTG GAAGTTCACC TCCGGCAAGG CCGAAACCTG CATCACGGTG
GGCCAGATGG CCAGCGGCGA GGGTGAAAAG GCCTACTTTG TGCGCGACAA CGGCGCCGGC
TTTGACATGG CCTATGCCGC AAAGCTGTTT GGCGCCTTCC AGCGCCTGCA TACCGAGGCT
GAATTTGCCG GAACCGGCAT TGGCCTGGCC ACCGTGCAGC GCATCATTGC GCGCCACGGC
GGCAGGGTCT GGGCGGAGTC GGTGCAAGGC GAGGGCGCCA CGTTTTACTT CACGCTGGGC
GCGGCGGCGG CCTGA
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| Protein sequence | MLSRLGLRSR LMLLVLAALV PVFSLFSCSA AKNQQAVLAL ARASLQSQAL LAAAHQQRLV
ERVAQLLGDI ASGPSIKNPR NRLCVQFLKN LQAQDPGYSN LGVADLDGRL SCDAVNSGAP
VNLADRSFFR QVLGGQAFSV GDYVVARSSG RPGMAFGVPV YSGEGVLNGV AFAGIAIQEF
AAVLAAEPVV EGARLRVIDR NGIVLAAHPP AAGLAGSREP DAVVLGALQS LQPEVREAAD
AGGIEQVYAF APVSGSQGGL FVAISVPRDV LTAAPRALLL ADLAALLGVT AFGMACAWAM
GRRLVVNPAN AILEEANEIA RGNLHARVRL GRWNQDEIGR LGLAFNRMAQ SLQAQCSERD
AALRQADAER AMRDLILNSM SEGVIAVDAG GRFMLFNAAA RKIFCVPATD MLFDEWRKIN
PLRMLDGQIM ASDGPLKQTL RGVSIDKLDL VFSSPDSQNR ILRMSTRPLL DPQGQQIGAL
AVFIDVTQTK AAESFALAQE NVLVLIAGGA ALGESLEAIV LLIEKSAPQS LCSILMAEGG
QLRHGIAPSL PPDFVRAIDG LPIAEGVGAC GTAAFRKESV IIEDVTQDAR MHGYQELLAA
HGLRACWSTP VVAGDGEVLA TFAIYRRAPG GPLPADLALI ATATRLARLA LERARVKAEL
IGSEANFREL AENIEDVFYN LDIHHGSPRL RYVSPRYEKV WGRSCESLYA APVSRADAVL
PEDRHVMVRA DARNAAGQNA NVEYRILSTD GRTRWIRDRS YPMFNDAGEV VRVVGTARDI
TESKLAEIAL ISTHRALQML SRSSIAINRI HDEAGLLAEV CRVAVEVGGY RMAWVGYASD
DEEKKIQPVA HAGSELGYLD VITLYWRDDL PGGQGPAGQA IRTGRPQQVS DISKPGSQFH
WTDAAVQRGY HSVLMLPLCS EQRSFGVLCL YAGQVQEFAP EEVNLLQELA DNLAFGIVSL
RTRLERSQAR EEILQLNASL EERVEQRTAQ LRFANQQLEA FSYSVSHDLR TPLSSIDGFS
TLLEKSLTRP DSAPLTERSR HCLARIRSGA RQMGDLIDAM LALAQVSRSS LVWEAVDLSA
SAGALLSGLH EREPGRIARL QVEPGMRVQG DPRLLRQVLD NLLGNAWKFT SGKAETCITV
GQMASGEGEK AYFVRDNGAG FDMAYAAKLF GAFQRLHTEA EFAGTGIGLA TVQRIIARHG
GRVWAESVQG EGATFYFTLG AAAA
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